chr9:131572909:G>A Detail (hg38)

Information

Genome

Assembly Position
hg19 chr9:134,448,296-134,448,296 View the variant detail on this assembly version.
hg38 chr9:131,572,909-131,572,909

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.716
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.006 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.393 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.466 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.370 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.330 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.003 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
0.001 Diabetes Mellitus, Non-Insulin-Dependent Using SNP- and gene-based analysis methods, we replicated previously reported SN... BeFree 18678618 Detail
Annotation

Annotations

DescrptionSourceLinks
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Using SNP- and gene-based analysis methods, we replicated previously reported SNP-type 2 diabetes as... DisGeNET Detail
Gene
-
dbSNP
rs4740283 dbSNP
Genome
hg38
Position
chr9:131,572,909-131,572,909
Variant Type
snv
Reference Allele
G
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs4740283
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.7165
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
12009
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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