chr6:81418669:T>C Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:82,128,386-82,128,386 View the variant detail on this assembly version. |
| hg38 | chr6:81,418,669-81,418,669 |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.181 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Malignant neoplasm of breast | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
| <0.001 | breast carcinoma | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
| 0.120 | Malignant neoplasm of breast | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
| 0.023 | breast carcinoma | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
| <0.001 | breast carcinoma | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
| 0.043 | Malignant neoplasm of breast | Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCD... | BeFree | 23593120 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
| Three additional SNPs, including rs1011970 (9p21/CDKN2A/2B), rs941764 (14q32/CCDC88C), and rs1752911... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs17529111 dbSNP
- Genome
- hg38
- Position
- chr6:81,418,669-81,418,669
- Variant Type
- snv
- Reference Allele
- T
- Alternative Allele
- C
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs17529111
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.1805
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 3025
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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