chr4:186285711:T>G Detail (hg38) (F11)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr4:187,206,865-187,206,865 View the variant detail on this assembly version. |
| hg38 | chr4:186,285,711-186,285,711 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_000128.3:c.1378T>G | NP_000119.1:p.Phe460Val |
| Ensemble | ENST00000403665.7:c.1378T>G | ENST00000403665.7:p.Phe460Val |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:[No Data.] | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:<0.001 |
Prediction
ClinVar
| Clinical Significance |
Pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Pathogenic
|
1995-08-01 | no assertion criteria provided | Hereditary factor XI deficiency disease |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.587 | factor XI deficiency | NA | CLINVAR | Detail | |
| 0.587 | factor XI deficiency | Identification of two novel mutations in non-Jewish factor XI deficiency. | UNIPROT | 7669672 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000128.4(F11):c.1378T>G (p.Phe460Val) AND Hereditary factor XI deficiency disease | ClinVar | Detail |
| NA | DisGeNET | Detail |
| Identification of two novel mutations in non-Jewish factor XI deficiency. | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs121965065 dbSNP
- Genome
- hg38
- Position
- chr4:186,285,711-186,285,711
- Variant Type
- snv
- Reference Allele
- T
- Alternative Allele
- G
- East Asian Chromosome Counts (ExAC)
- 8652
- East Asian Allele Counts (ExAC)
- 0
- East Asian Heterozygous Counts (ExAC)
- 0
- East Asian Homozygous Counts (ExAC)
- 0
- East Asian Allele Frequency (ExAC)
- 0.0
- Chromosome Counts in All Race (ExAC)
- 121338
- Allele Counts in All Race (ExAC)
- 1
- Heterozygous Counts in All Race (ExAC)
- 1
- Homozygous Counts in All Race (ExAC)
- 0
- Allele Frequency in All Race (ExAC)
- 8.241441263248117E-6
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