chr3:48580881:C>G Detail (hg38) (COL7A1)

Information

Genome

Assembly Position
hg19 chr3:48,618,314-48,618,314 View the variant detail on this assembly version.
hg38 chr3:48,580,881-48,580,881

HGVS

Type Transcript Protein
RefSeq NM_000094.3:c.4980+1G>C
Ensemble ENST00000328333.12:c.4980+1G>C
ENST00000681320.1:c.4980+1G>C
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 120120 OMIM
HGNC 2214 HGNC
Ensembl ENSG00000114270 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Likely pathogenic 2014-06-05 no assertion criteria provided recessive dystrophic epidermolysis bullosa germline Detail
Pathogenic 2021-06-14 criteria provided, single submitter not provided germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.458 Hallopeau-Siemens Disease NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000094.4(COL7A1):c.4980+1G>C AND Recessive dystrophic epidermolysis bullosa ClinVar Detail
NM_000094.4(COL7A1):c.4980+1G>C AND not provided ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs730880285 dbSNP
Genome
hg38
Position
chr3:48,580,881-48,580,881
Variant Type
snv
Reference Allele
C
Alternative Allele
G
Genome browser