chr3:14148732:C>G Detail (hg38) (XPC)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr3:14,190,232-14,190,232 View the variant detail on this assembly version. |
| hg38 | chr3:14,148,732-14,148,732 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_004628.4:c.2251-1G>C | |
| Ensemble | ENST00000285021.12:c.2251-1G>C |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:[No Data.] | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:<0.001 |
Prediction
ClinVar
| Clinical Significance |
Pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Pathogenic
|
2024-03-17 | criteria provided, multiple submitters, no conflicts | Xeroderma pigmentosum, group C |
germline
unknown
|
Detail |
|
Pathogenic
|
2023-07-01 | criteria provided, multiple submitters, no conflicts | xeroderma pigmentosum |
germline
|
Detail |
|
Pathogenic
|
2024-01-08 | criteria provided, multiple submitters, no conflicts | not provided |
germline
|
Detail |
|
Pathogenic
|
2023-12-21 | criteria provided, single submitter | XPC-related disorder |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.569 | XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_004628.5(XPC):c.2251-1G>C AND Xeroderma pigmentosum, group C | ClinVar | Detail |
| NM_004628.5(XPC):c.2251-1G>C AND Xeroderma pigmentosum | ClinVar | Detail |
| NM_004628.5(XPC):c.2251-1G>C AND not provided | ClinVar | Detail |
| NM_004628.5(XPC):c.2251-1G>C AND XPC-related disorder | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs754673606 dbSNP
- Genome
- hg38
- Position
- chr3:14,148,732-14,148,732
- Variant Type
- snv
- Reference Allele
- C
- Alternative Allele
- G
- East Asian Chromosome Counts (ExAC)
- 8626
- East Asian Allele Counts (ExAC)
- 0
- East Asian Heterozygous Counts (ExAC)
- 0
- East Asian Homozygous Counts (ExAC)
- 0
- East Asian Allele Frequency (ExAC)
- 0.0
- Chromosome Counts in All Race (ExAC)
- 120678
- Allele Counts in All Race (ExAC)
- 2
- Heterozygous Counts in All Race (ExAC)
- 2
- Homozygous Counts in All Race (ExAC)
- 0
- Allele Frequency in All Race (ExAC)
- 1.657302905251993E-5
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