chr3:10146638:T>G Detail (hg38) (VHL, LOC107303340)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
Genome browser

Information

Genome

Assembly	Position
hg19	chr3:10,188,322-10,188,322 View the variant detail on this assembly version.
hg38	chr3:10,146,638-10,146,638

HGVS

VHL

Type	Transcript	Protein
RefSeq	NM_000551.3:c.463+2T>G
	NM_198156.2:c.341-3149T>G
Ensemble	ENST00000256474.3:c.463+2T>G
	ENST00000345392.3:c.341-3149T>G
	ENST00000696143.2:c.*18-3149T>G
	ENST00000696153.1:c.463+2T>G
	ENST00000713811.1:c.463+2T>G
	ENST00000713812.1:c.342+2T>G
	ENST00000713815.1:c.159+2T>G
	ENST00000713982.1:c.368+2T>G

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Likely pathogenic
Review star
Show details

Links

VHL

Type	Database	ID	Link
Gene	MIM	608537	OMIM
	HGNC	12687	HGNC
	Ensembl	ENSG00000134086	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM422839	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Likely pathogenic	2009-11-30	no assertion criteria provided	Von Hippel-Lindau syndrome	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.658	Von Hippel-Lindau syndrome	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000551.4(VHL):c.463+2T>G AND Von Hippel-Lindau syndrome	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs5030814 dbSNP
Genome: hg38
Position: chr3:10,146,638-10,146,638
Variant Type: snv
Reference Allele: T
Alternative Allele: G

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