chr22:50627051:C>T Detail (hg38) (ARSA)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr22:51,065,479-51,065,479 View the variant detail on this assembly version.
hg38	chr22:50,627,051-50,627,051

HGVS

ARSA

Type	Transcript	Protein
RefSeq	NM_000487.5:c.467G>A	NP_000478.3:p.Gly156Asp
	NM_001085426.2:c.467G>A	NP_001078895.2:p.Gly156Asp
	NM_001085427.2:c.467G>A	NP_001078896.2:p.Gly156Asp
	NM_001085425.2:c.467G>A	NP_001078894.2:p.Gly156Asp
	NM_001085428.2:c.209G>A	NP_001078897.1:p.Gly70Asp
Ensemble	ENST00000216124.10:c.467G>A	ENST00000216124.10:p.Gly156Asp
	ENST00000356098.9:c.467G>A	ENST00000356098.9:p.Gly156Asp
	ENST00000395619.3:c.467G>A	ENST00000395619.3:p.Gly156Asp
	ENST00000395621.7:c.467G>A	ENST00000395621.7:p.Gly156Asp
	ENST00000453344.6:c.209G>A	ENST00000453344.6:p.Gly70Asp

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Likely pathogenic
Review star
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Links

ARSA

Type	Database	ID	Link
Gene	MIM	607574	OMIM
	HGNC	713	HGNC
	Ensembl	ENSG00000100299	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Likely pathogenic	2022-12-20	criteria provided, multiple submitters, no conflicts	metachromatic leukodystrophy	germline not applicable unknown	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.514	Leukodystrophy, Metachromatic	Molecular analysis of ARSA and PSAP genes in twenty-one Italian patients with me...	UNIPROT	18693274	Detail
0.514	Leukodystrophy, Metachromatic	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000487.6(ARSA):c.467G>A (p.Gly156Asp) AND Metachromatic leukodystrophy	ClinVar	Detail
Molecular analysis of ARSA and PSAP genes in twenty-one Italian patients with metachromatic leukodys...	DisGeNET	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs74315463 dbSNP
Genome: hg38
Position: chr22:50,627,051-50,627,051
Variant Type: snv
Reference Allele: C
Alternative Allele: T

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