chr1:6192878:G>A Detail (hg38) (RPL22)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr1:6,252,938-6,252,938 View the variant detail on this assembly version. |
| hg38 | chr1:6,192,878-6,192,878 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_000983.3:c.242+52C>T | |
| Ensemble | ENST00000234875.9:c.242+52C>T | |
| ENST00000497965.5:c.143+52C>T |
Summary
MGeND
| Clinical significance |
not provided
|
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:[No Data.] | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:<0.001 |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Disease area statistics
MGeND
| Clinical significance | Last evaluated | Condition | Origin | Submission ID | Submitter | Institute | Citation | Comment | Image |
|---|---|---|---|---|---|---|---|---|---|
|
not provided
|
2017/05/11 | carcinoma, non-small-cell lung |
somatic
|
MGS000014
(TMGS000028) |
Kohei Miyazono | Tokyo University |
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
[No Data.]
Annotation
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- Genome
- hg38
- Position
- chr1:6,192,878-6,192,878
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
- East Asian Chromosome Counts (ExAC)
- 8652
- East Asian Allele Counts (ExAC)
- 0
- East Asian Heterozygous Counts (ExAC)
- 0
- East Asian Homozygous Counts (ExAC)
- 0
- East Asian Allele Frequency (ExAC)
- 0.0
- Chromosome Counts in All Race (ExAC)
- 120622
- Allele Counts in All Race (ExAC)
- 1
- Heterozygous Counts in All Race (ExAC)
- 1
- Homozygous Counts in All Race (ExAC)
- 0
- Allele Frequency in All Race (ExAC)
- 8.290361625574107E-6
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