chr1:45331835:G>A Detail (hg38) (MUTYH)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
Genome browser

Information

Genome

Assembly	Position
hg19	chr1:45,797,507-45,797,507 View the variant detail on this assembly version.
hg38	chr1:45,331,835-45,331,835

HGVS

MUTYH

Type	Transcript	Protein
RefSeq	NM_001048172.1:c.928C>T	NP_001041637.1:p.Gln310Ter
	NM_001048173.1:c.928C>T	NP_001041638.1:p.Gln310Ter
	NM_001293196.1:c.928C>T	NP_001280125.1:p.Gln310Ter
	NM_001293195.1:c.928C>T	NP_001280124.1:p.Gln310Ter
	NM_001048171.1:c.970C>T	NP_001041636.1:p.Gln324Ter
	NM_001293190.1:c.970C>T	NP_001280119.1:p.Gln324Ter
	NM_001293192.1:c.970C>T	NP_001280121.1:p.Gln324Ter
	NM_012222.2:c.970C>T	NP_036354.1:p.Gln324Ter
	NM_001048174.1:c.928C>T	NP_001041639.1:p.Gln310Ter
	NM_001293191.1:c.928C>T	NP_001280120.1:p.Gln310Ter
Ensemble	ENST00000354383.10:c.931C>T	ENST00000354383.10:p.Gln311Ter
	ENST00000355498.6:c.928C>T	ENST00000355498.6:p.Gln310Ter
	ENST00000372098.7:c.1003C>T	ENST00000372098.7:p.Gln335Ter
	ENST00000372104.5:c.928C>T	ENST00000372104.5:p.Gln310Ter
	ENST00000372110.7:c.973C>T	ENST00000372110.7:p.Gln325Ter
	ENST00000372115.7:c.970C>T	ENST00000372115.7:p.Gln324Ter
	ENST00000412971.6:c.544C>T	ENST00000412971.6:p.Gln182Ter
	ENST00000448481.5:c.961C>T	ENST00000448481.5:p.Gln321Ter
	ENST00000456914.7:c.928C>T	ENST00000456914.7:p.Gln310Ter
	ENST00000483127.2:c.946C>T	ENST00000483127.2:p.Gln316Ter
	ENST00000488731.6:c.188-279C>T
	ENST00000528013.6:c.970C>T	ENST00000528013.6:p.Gln324Ter
	ENST00000529892.6:c.955+188C>T
	ENST00000529984.5:c.188-279C>T
	ENST00000531105.5:c.116-2398C>T
	ENST00000672314.2:c.928C>T	ENST00000672314.2:p.Gln310Ter
	ENST00000672818.3:c.1003C>T	ENST00000672818.3:p.Gln335Ter
	ENST00000710952.2:c.1012C>T	ENST00000710952.2:p.Gln338Ter
	ENST00000713750.1:c.928C>T	ENST00000713750.1:p.Gln310Ter
	ENST00000713751.1:c.949C>T	ENST00000713751.1:p.Gln317Ter

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

JP	HGVD:[No Data.]
	ToMMo:[No Data.]
	NCBN:[No Data.]
	NCBN(Hondo):[No Data.]
	NCBN(Ryukyu):[No Data.]
East asia	ExAC:<0.001

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
Show details

Links

MUTYH

Type	Database	ID	Link
Gene	MIM	604933	OMIM
	HGNC	7527	HGNC
	Ensembl	ENSG00000132781	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2022-12-14	criteria provided, multiple submitters, no conflicts	Hereditary cancer-predisposing syndrome	germline	Detail
Pathogenic	2022-10-27	criteria provided, multiple submitters, no conflicts	not provided	germline unknown	Detail
Pathogenic	2023-12-29	criteria provided, multiple submitters, no conflicts	familial adenomatous polyposis 2	germline unknown	Detail
Pathogenic	2021-11-18	criteria provided, single submitter	familial adenomatous polyposis 2,Gastric cancer	unknown	Detail
Pathogenic	2021-11-18	criteria provided, single submitter	familial adenomatous polyposis 2,Gastric cancer	unknown	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.120	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_001048174.2(MUTYH):c.928C>T (p.Gln310Ter) AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_001048174.2(MUTYH):c.928C>T (p.Gln310Ter) AND not provided	ClinVar	Detail
NM_001048174.2(MUTYH):c.928C>T (p.Gln310Ter) AND Familial adenomatous polyposis 2	ClinVar	Detail
NM_001048174.2(MUTYH):c.928C>T (p.Gln310Ter) AND multiple conditions	ClinVar	Detail
NM_001048174.2(MUTYH):c.928C>T (p.Gln310Ter) AND multiple conditions	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs587780082 dbSNP
Genome: hg38
Position: chr1:45,331,835-45,331,835
Variant Type: snv
Reference Allele: G
Alternative Allele: A
East Asian Chromosome Counts (ExAC): 6278
East Asian Allele Counts (ExAC): 0
East Asian Heterozygous Counts (ExAC): 0
East Asian Homozygous Counts (ExAC): 0
East Asian Allele Frequency (ExAC): 0.0
Chromosome Counts in All Race (ExAC): 92548
Allele Counts in All Race (ExAC): 11
Heterozygous Counts in All Race (ExAC): 11
Homozygous Counts in All Race (ExAC): 0
Allele Frequency in All Race (ExAC): 1.1885724164757747E-4

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