chr1:42929884:C>G Detail (hg38) (SLC2A1)

Information

Genome

Assembly Position
hg19 chr1:43,395,555-43,395,555 View the variant detail on this assembly version.
hg38 chr1:42,929,884-42,929,884

HGVS

Type Transcript Protein
RefSeq NM_006516.2:c.668G>C NP_006507.2:p.Arg223Pro
Ensemble ENST00000426263.10:c.668G>C ENST00000426263.10:p.Arg223Pro
ENST00000674765.1:c.668G>C ENST00000674765.1:p.Arg223Pro
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance risk factor
Review star
Show details
Links
Type Database ID Link
Gene MIM 138140 OMIM
HGNC 11005 HGNC
Ensembl ENSG00000117394 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
risk factor 2015-06-04 no assertion criteria provided Epilepsy, idiopathic generalized, susceptibility to, 12 germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.240 Epilepsy, idiopathic generalized, susceptibility to, 12 NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_006516.4(SLC2A1):c.668G>C (p.Arg223Pro) AND Epilepsy, idiopathic generalized, susceptibility to, ... ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs397514564 dbSNP
Genome
hg38
Position
chr1:42,929,884-42,929,884
Variant Type
snv
Reference Allele
C
Alternative Allele
G
Genome browser