chrX:135743991:G>T Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chrX:135,743,991-135,743,991 |
| hg38 | chrX:136,661,832-136,661,832 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.127 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.006 | rheumatoid arthritis | One thousand five hundred and seventy-five patients fulfilling the 1987 ACR clas... | BeFree | 23166616 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| One thousand five hundred and seventy-five patients fulfilling the 1987 ACR classification criteria ... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs3092920 dbSNP
- Genome
- hg19
- Position
- chrX:135,743,991-135,743,991
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- T
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs3092920
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.1267
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 1627
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 12843
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