chr9:21971208:C>G Detail (hg19) (CDKN2A)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr9:21,971,208-21,971,208
hg38	chr9:21,971,209-21,971,209 View the variant detail on this assembly version.

HGVS

CDKN2A

Type	Transcript	Protein
RefSeq	NM_058195.3:c.194-1G>C
	NM_001195132.1:c.151-1G>C
	NM_000077.4:c.151-1G>C
Ensemble	ENST00000579755.2:c.194-1G>C
	ENST00000498124.1:c.151-1G>C
	ENST00000497750.1:c.-3-1G>C
	ENST00000498628.6:c.-3-1G>C
	ENST00000530628.2:c.194-1G>C
	ENST00000578845.2:c.-4G>C
	ENST00000304494.10:c.151-1G>C
	ENST00000479692.2:c.-3-1G>C
	ENST00000494262.5:c.-3-1G>C
	ENST00000579122.1:c.151-1G>C

Summary

MGeND

Clinical significance	not provided
Variant entry	2
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
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Links

CDKN2A

Type	Database	ID	Link
Gene	MIM	600160	OMIM
	HGNC	1787	HGNC
	Ensembl	ENSG00000147889	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM1742984	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
not provided		ill-defined sites within the digestive system	not provided	MGS000042 (TMGS000093)	Hitoshi Nakagama	National Cancer Center Japan
not provided		bronchus or lung, unspecified	not provided	MGS000042 (TMGS000093)	Hitoshi Nakagama	National Cancer Center Japan

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2023-12-26	criteria provided, single submitter	Hereditary cancer-predisposing syndrome	germline	Detail
Pathogenic	2016-08-20	criteria provided, single submitter	not provided	germline	Detail
Pathogenic	2023-10-09	criteria provided, single submitter	familial melanoma	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.121	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000077.5(CDKN2A):c.151-1G>C AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_000077.5(CDKN2A):c.151-1G>C AND not provided	ClinVar	Detail
NM_000077.5(CDKN2A):c.151-1G>C AND Familial melanoma	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs730881677 dbSNP
Genome: hg19
Position: chr9:21,971,208-21,971,208
Variant Type: snv
Reference Allele: C
Alternative Allele: G

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