chr9:21114237:A>G Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr9:21,114,237-21,114,237 |
| hg38 | chr9:21,114,238-21,114,238 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.535 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.001 | Malignant neoplasm of breast | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.001 | Carcinoma of bladder | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.001 | Carcinoma of lung | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.001 | Malignant neoplasm of lung | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.001 | Malignant neoplasm of urinary bladder | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.015 | Carcinoma of bladder | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| <0.001 | stomach carcinoma | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.001 | breast carcinoma | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.038 | Malignant neoplasm of lung | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| <0.001 | Malignant neoplasm of stomach | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.030 | Carcinoma of lung | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.023 | breast carcinoma | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.043 | Malignant neoplasm of breast | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
| 0.022 | Malignant neoplasm of urinary bladder | ASSET analyses identified four SNPs significantly associated with multiple cance... | BeFree | 25239644 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
| ASSET analyses identified four SNPs significantly associated with multiple cancers: rs3731239 (CDKN2... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs10811474 dbSNP
- Genome
- hg19
- Position
- chr9:21,114,237-21,114,237
- Variant Type
- snv
- Reference Allele
- A
- Alternative Allele
- G
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs10811474
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.5353
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 8972
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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