chr7:23594050:C>T Detail (hg19)

Information

Genome

Assembly Position
hg19 chr7:23,594,050-23,594,050
hg38 chr7:23,554,431-23,554,431 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.403
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.003 Diabetes Mellitus, Non-Insulin-Dependent We analysed here the association between T2D (and related traits) and rs4402960 ... BeFree 20627640 Detail
0.003 Diabetes Mellitus, Non-Insulin-Dependent We analysed here the association between T2D (and related traits) and rs4402960 ... BeFree 20627640 Detail
Annotation

Annotations

DescrptionSourceLinks
We analysed here the association between T2D (and related traits) and rs4402960 and rs1470579 in IGF... DisGeNET Detail
We analysed here the association between T2D (and related traits) and rs4402960 and rs1470579 in IGF... DisGeNET Detail
Gene
-
dbSNP
rs6949019 dbSNP
Genome
hg19
Position
chr7:23,594,050-23,594,050
Variant Type
snv
Reference Allele
C
Alternative Allele
T
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs6949019
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.4025
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
6745
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16756
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