chr7:116422081:G>A Detail (hg19) (MET)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr7:116,422,081-116,422,081
hg38	chr7:116,782,027-116,782,027 View the variant detail on this assembly version.

HGVS

MET

Type	Transcript	Protein
RefSeq	NM_001127500.2:c.3616G>A	NP_001120972.1:p.Val1206Ile
	NM_000245.3:c.3562G>A	NP_000236.2:p.Val1188Ile
	NM_001324402.1:c.3562G>A	NP_001311331.1:p.Val1188Ile
Ensemble	ENST00000318493.11:c.3616G>A	ENST00000318493.11:p.Val1206Ile
	ENST00000397752.8:c.3562G>A	ENST00000397752.8:p.Val1188Ile

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

JP	HGVD:[No Data.]
	ToMMo:[No Data.]
	NCBN:[No Data.]
	NCBN(Hondo):[No Data.]
	NCBN(Ryukyu):[No Data.]
East asia	ExAC:<0.001

Prediction

ClinVar

Clinical Significance	Uncertain significance
Review star
Show details

Links

MET

Type	Database	ID	Link
Gene	MIM	164860	OMIM
	HGNC	7029	HGNC
	Ensembl	ENSG00000105976	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Uncertain significance	2017-11-08	criteria provided, single submitter	renal cell carcinoma	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.253	renal cell carcinoma	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000245.4(MET):c.3562G>A (p.Val1188Ile) AND Renal cell carcinoma	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs121913669 dbSNP
Genome: hg19
Position: chr7:116,422,081-116,422,081
Variant Type: snv
Reference Allele: G
Alternative Allele: A
East Asian Chromosome Counts (ExAC): 8482
East Asian Allele Counts (ExAC): 1
East Asian Heterozygous Counts (ExAC): 1
East Asian Homozygous Counts (ExAC): 0
East Asian Allele Frequency (ExAC): 1.178967224711153E-4
Chromosome Counts in All Race (ExAC): 116298
Allele Counts in All Race (ExAC): 1
Heterozygous Counts in All Race (ExAC): 1
Homozygous Counts in All Race (ExAC): 0
Allele Frequency in All Race (ExAC): 8.598600147895923E-6

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