chr3:37038124:C>T Detail (hg19) (MLH1)
Information
Genome
Assembly | Position |
---|---|
hg19 | chr3:37,038,124-37,038,124 |
hg38 | chr3:36,996,633-36,996,633 View the variant detail on this assembly version. |
HGVS
Type | Transcript | Protein |
---|---|---|
RefSeq | NM_000249.3:c.131C>T | NP_000240.1:p.Ser44Phe |
NM_001167617.1:c.-159C>T | ||
NM_001167618.1:c.-593C>T |
Summary
MGeND
Clinical significance | |
Variant entry | |
GWAS entry | |
Disease area statistics | Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
---|---|---|---|---|---|
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1994-03-17 | no assertion criteria provided | Colorectal cancer, hereditary nonpolyposis, type 2 |
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Detail |
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2013-09-05 | reviewed by expert panel | Lynch syndrome |
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Detail |
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2014-09-16 | criteria provided, single submitter | not provided |
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Detail |
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2022-08-29 | criteria provided, single submitter | Hereditary cancer-predisposing syndrome |
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Detail |
CIViC
[No Data.]
DisGeNET
Score | Disease name | Description | Source | Pubmed | Links |
---|---|---|---|---|---|
0.440 | Hereditary Non-Polyposis Colon Cancer Type 2 | NA | CLINVAR | Detail | |
0.329 | Hereditary Nonpolyposis Colorectal Cancer | NA | CLINVAR | Detail |
Annotation
Annotations
Descrption | Source | Links |
---|---|---|
NM_000249.4(MLH1):c.131C>T (p.Ser44Phe) AND Colorectal cancer, hereditary nonpolyposis, type 2 | ClinVar | Detail |
NM_000249.4(MLH1):c.131C>T (p.Ser44Phe) AND Lynch syndrome | ClinVar | Detail |
NM_000249.4(MLH1):c.131C>T (p.Ser44Phe) AND not provided | ClinVar | Detail |
NM_000249.4(MLH1):c.131C>T (p.Ser44Phe) AND Hereditary cancer-predisposing syndrome | ClinVar | Detail |
NA | DisGeNET | Detail |
NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
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Overlapped Transcript
Gene | Transcript ID | Chromosome | Start | Stop | Links |
---|
- Gene
- -
- dbSNP
- rs63751109 dbSNP
- Genome
- hg19
- Position
- chr3:37,038,124-37,038,124
- Variant Type
- snv
- Reference Allele
- C
- Alternative Allele
- T
Genome browser