chr3:186566877:G>A Detail (hg19) (ADIPOQ)

Information

Genome

Assembly Position
hg19 chr3:186,566,877-186,566,877
hg38 chr3:186,849,088-186,849,088 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_004797.3:c.-8-3963G>A
NM_001177800.1:c.-9+3481G>A
Ensemble ENST00000320741.7:c.-8-3963G>A
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.949
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Type Database ID Link
Gene MIM 605441 OMIM
HGNC 13633 HGNC
Ensembl ENSG00000181092 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar tgv15449471 TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.011 Vascular Diseases From a group of DNA samples collected at baseline in a prospective cohort of 14 ... BeFree 16990411 Detail
Annotation

Annotations

DescrptionSourceLinks
From a group of DNA samples collected at baseline in a prospective cohort of 14 916 initially health... DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs822396 dbSNP
Genome
hg19
Position
chr3:186,566,877-186,566,877
Variant Type
snv
Reference Allele
G
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs822396
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.9493
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
15910
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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