chr3:122002636:T>C Detail (hg19) (CASR)

Information

Genome

Assembly Position
hg19 chr3:122,002,636-122,002,636
hg38 chr3:122,283,789-122,283,789 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_001178065.1:c.1865T>C NP_001171536.1:p.Phe622Ser
NM_000388.3:c.1835T>C NP_000379.2:p.Phe612Ser
Ensemble ENST00000490131.7:c.1604T>C ENST00000490131.7:p.Phe535Ser
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Likely pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 601199 OMIM
HGNC 1514 HGNC
Ensembl ENSG00000036828 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 1996-10-10 no assertion criteria provided autosomal dominant hypocalcemia 1 germline Detail
Likely pathogenic 2024-01-12 criteria provided, single submitter Nephrolithiasis/nephrocalcinosis germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.131 Hypoparathyroidism - autosomal dominant NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000388.4(CASR):c.1835T>C (p.Phe612Ser) AND Autosomal dominant hypocalcemia 1 ClinVar Detail
NM_000388.4(CASR):c.1835T>C (p.Phe612Ser) AND Nephrolithiasis/nephrocalcinosis ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs104893698 dbSNP
Genome
hg19
Position
chr3:122,002,636-122,002,636
Variant Type
snv
Reference Allele
T
Alternative Allele
C
Genome browser