chr19:42474450:A>T Detail (hg19) (ATP1A3)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr19:42,474,450-42,474,450
hg38	chr19:41,970,298-41,970,298 View the variant detail on this assembly version.

HGVS

ATP1A3

Type	Transcript	Protein
RefSeq	NM_001256213.1:c.2462T>A	NP_001243142.1:p.Ile821Asn
	NM_001256214.1:c.2468T>A	NP_001243143.1:p.Ile823Asn
Ensemble	ENST00000543770.5:c.2462T>A	ENST00000543770.5:p.Ile821Asn
	ENST00000545399.6:c.2468T>A	ENST00000545399.6:p.Ile823Asn
	ENST00000602133.5:c.2339T>A	ENST00000602133.5:p.Ile780Asn
	ENST00000648268.1:c.2429T>A	ENST00000648268.1:p.Ile810Asn

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance
Review star	[No Data.]
Show details

Links

ATP1A3

Type	Database	ID	Link
Gene	MIM	182350	OMIM
	HGNC	801	HGNC
	Ensembl	ENSG00000105409	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

[No Data.]

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.240	Alternating hemiplegia of childhood 2	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs536681257 dbSNP
Genome: hg19
Position: chr19:42,474,450-42,474,450
Variant Type: snv
Reference Allele: A
Alternative Allele: T

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