chr18:29172907:G>A Detail (hg19) (TTR)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr18:29,172,907-29,172,907 |
| hg38 | chr18:31,592,944-31,592,944 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_000371.3:c.118G>A | NP_000362.1:p.Val40Ile |
| Ensemble | ENST00000237014.8:c.118G>A | ENST00000237014.8:p.Val40Ile |
| ENST00000610404.5:c.22G>A | ENST00000610404.5:p.Val8Ile |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
Pathogenic
|
2023-10-10 | criteria provided, single submitter | Familial amyloid neuropathy |
germline
|
Detail |
|
Pathogenic
|
2021-12-01 | criteria provided, multiple submitters, no conflicts | not provided |
germline
|
Detail |
|
Pathogenic
|
2022-04-05 | criteria provided, single submitter |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.012 | Cardiomyopathies | The Wagshurst study: p.Val40Ile transthyretin gene variant causes late-onset car... | BeFree | 25291558 | Detail |
| 0.488 | AMYLOIDOSIS, HEREDITARY, TRANSTHYRETIN-RELATED | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000371.4(TTR):c.118G>A (p.Val40Ile) AND Familial amyloid neuropathy | ClinVar | Detail |
| NM_000371.4(TTR):c.118G>A (p.Val40Ile) AND not provided | ClinVar | Detail |
| NM_000371.4(TTR):c.118G>A (p.Val40Ile) AND Cardiovascular phenotype | ClinVar | Detail |
| The Wagshurst study: p.Val40Ile transthyretin gene variant causes late-onset cardiomyopathy. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs121918093 dbSNP
- Genome
- hg19
- Position
- chr18:29,172,907-29,172,907
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser