chr17:29548872:T>C Detail (hg19) (NF1)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr17:29,548,872-29,548,872
hg38	chr17:31,221,854-31,221,854 View the variant detail on this assembly version.

HGVS

NF1

Type	Transcript	Protein
RefSeq	NM_000267.3:c.1646T>C	NP_000258.1:p.Leu549Pro
	NM_001128147.2:c.1646T>C	NP_001121619.1:p.Leu549Pro
	NM_001042492.2:c.1646T>C	NP_001035957.1:p.Leu549Pro
Ensemble	ENST00000691014.1:c.1676T>C	ENST00000691014.1:p.Leu559Pro
	ENST00000356175.7:c.1646T>C	ENST00000356175.7:p.Leu549Pro
	ENST00000431387.8:c.1646T>C	ENST00000431387.8:p.Leu549Pro
	ENST00000696138.1:c.1691T>C	ENST00000696138.1:p.Leu564Pro
	ENST00000358273.9:c.1646T>C	ENST00000358273.9:p.Leu549Pro

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic Likely pathogenic
Review star
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Links

NF1

Type	Database	ID	Link
Gene	MIM	613113	OMIM
	HGNC	7765	HGNC
	Ensembl	ENSG00000196712	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Likely pathogenic	2022-05-26	criteria provided, single submitter	not provided	germline not provided	Detail
Pathogenic Likely pathogenic	2022-11-19	criteria provided, multiple submitters, no conflicts	Neurofibromatosis, type 1	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.670	neurofibromatosis 1	More than 500 unrelated patients with neurofibromatosis type 1 (NF1) were screen...	UNIPROT	10712197	Detail

Annotation

Annotations

Descrption	Source	Links
NM_001042492.3(NF1):c.1646T>C (p.Leu549Pro) AND not provided	ClinVar	Detail
NM_001042492.3(NF1):c.1646T>C (p.Leu549Pro) AND Neurofibromatosis, type 1	ClinVar	Detail
More than 500 unrelated patients with neurofibromatosis type 1 (NF1) were screened for mutations in ...	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs199474758 dbSNP
Genome: hg19
Position: chr17:29,548,872-29,548,872
Variant Type: snv
Reference Allele: T
Alternative Allele: C

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