chr17:28564170:G>A Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr17:28,564,170-28,564,170 |
| hg38 | chr17:30,237,152-30,237,152 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.008 | osteochondritis dissecans | Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was mor... | BeFree | 23630162 | Detail |
| <0.001 | obsessive-compulsive disorder | Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was mor... | BeFree | 23630162 | Detail |
| 0.176 | obsessive-compulsive disorder | Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was mor... | BeFree | 23630162 | Detail |
| <0.001 | osteochondritis dissecans | Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was mor... | BeFree | 23630162 | Detail |
| 0.008 | osteochondritis dissecans | Haplotype-based testing of rs25532 and all other known non-coding functional SLC... | BeFree | 18055562 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was more frequent in TD pro... | DisGeNET | Detail |
| Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was more frequent in TD pro... | DisGeNET | Detail |
| Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was more frequent in TD pro... | DisGeNET | Detail |
| Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was more frequent in TD pro... | DisGeNET | Detail |
| Haplotype-based testing of rs25532 and all other known non-coding functional SLC6A4 variants reveale... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs25532 dbSNP
- Genome
- hg19
- Position
- chr17:28,564,170-28,564,170
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser