chr16:10971020:G>A Detail (hg19) (CIITA)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr16:10,971,020-10,971,020 |
| hg38 | chr16:10,877,163-10,877,163 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
not provided
|
no assertion provided | not provided |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.016 | multiple sclerosis | The objective of this study was to investigate the association between the HLA a... | BeFree | 25992516 | Detail |
| 0.001 | myocardial infarction | A promoter polymorphism (-168A/G, rs3087456) in the MHC2TA gene was associated w... | BeFree | 17012290 | Detail |
| 0.253 | rheumatoid arthritis | The MHC2TA -168A/G polymorphism and risk for rheumatoid arthritis: a meta-analys... | BeFree | 17875550 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000246.3(CIITA):c.-168G>A AND not provided | ClinVar | Detail |
| The objective of this study was to investigate the association between the HLA alleles at the DQA1, ... | DisGeNET | Detail |
| A promoter polymorphism (-168A/G, rs3087456) in the MHC2TA gene was associated with increased suscep... | DisGeNET | Detail |
| The MHC2TA -168A/G polymorphism and risk for rheumatoid arthritis: a meta-analysis of 6861 patients ... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs199476059 dbSNP
- Genome
- hg19
- Position
- chr16:10,971,020-10,971,020
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser