chr14:35870454:C>T Detail (hg19)

Information

Genome

Assembly Position
hg19 chr14:35,870,454-35,870,454
hg38 chr14:35,401,248-35,401,248 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.370
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 Cerebrovascular accident Among whites, six SNPs were associated with stroke, with a nominal P-value of &l... BeFree 21114618 Detail
<0.001 Cerebrovascular accident Among whites, six SNPs were associated with stroke, with a nominal P-value of &l... BeFree 21114618 Detail
Annotation

Annotations

DescrptionSourceLinks
Among whites, six SNPs were associated with stroke, with a nominal P-value of &lt; 0.01: rs6046 and ... DisGeNET Detail
Among whites, six SNPs were associated with stroke, with a nominal P-value of &lt; 0.01: rs6046 and ... DisGeNET Detail
Gene
-
dbSNP
rs3138055 dbSNP
Genome
hg19
Position
chr14:35,870,454-35,870,454
Variant Type
snv
Reference Allele
C
Alternative Allele
T
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs3138055
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.3705
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
6209
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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