chr14:24728951:G>A Detail (hg19) (TGM1)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr14:24,728,951-24,728,951 |
| hg38 | chr14:24,259,745-24,259,745 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_000359.2:c.943C>T | NP_000350.1:p.Arg315Cys |
| Ensemble | ENST00000206765.11:c.943C>T | ENST00000206765.11:p.Arg315Cys |
| ENST00000544573.5:c.-28-1357C>T |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
Pathogenic
Likely pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Likely pathogenic
|
2023-09-07 | criteria provided, multiple submitters, no conflicts | autosomal recessive congenital ichthyosis 1 |
germline
unknown
|
Detail |
|
Pathogenic
|
2023-07-13 | criteria provided, single submitter | not provided |
germline
|
Detail |
|
Pathogenic
|
2023-06-21 | criteria provided, single submitter | Lamellar ichthyosis |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.120 | Ichthyosis Congenita II | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000359.3(TGM1):c.943C>T (p.Arg315Cys) AND Autosomal recessive congenital ichthyosis 1 | ClinVar | Detail |
| NM_000359.3(TGM1):c.943C>T (p.Arg315Cys) AND not provided | ClinVar | Detail |
| NM_000359.3(TGM1):c.943C>T (p.Arg315Cys) AND Lamellar ichthyosis | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs397514525 dbSNP
- Genome
- hg19
- Position
- chr14:24,728,951-24,728,951
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser