chr13:24293859:A>G Detail (hg19)

Information

Genome

Assembly Position
hg19 chr13:24,293,859-24,293,859
hg38 chr13:23,719,720-23,719,720 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.432
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.143 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.155 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.015 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.121 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.125 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
<0.001 Malignant neoplasm of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.009 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.003 Carcinoma of lung The combined analyses identified six well-replicated SNPs with independent effec... BeFree 21725308 Detail
0.002 Lung Neoplasms [A genome-wide association study identifies two new lung cancer susceptibility l... GAD 21725308 Detail
Annotation

Annotations

DescrptionSourceLinks
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
The combined analyses identified six well-replicated SNPs with independent effects and significant l... DisGeNET Detail
[A genome-wide association study identifies two new lung cancer susceptibility loci at 13q12.12 and ... DisGeNET Detail
Gene
-
dbSNP
rs753955 dbSNP
Genome
hg19
Position
chr13:24,293,859-24,293,859
Variant Type
snv
Reference Allele
A
Alternative Allele
G
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs753955
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.4319
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
7239
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
Genome browser