chr13:20763265:G>T Detail (hg19) (GJB2)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr13:20,763,265-20,763,265 |
| hg38 | chr13:20,189,126-20,189,126 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_004004.5:c.456C>A | NP_003995.2:p.Tyr152Ter |
| Ensemble | ENST00000382848.5:c.456C>A | ENST00000382848.5:p.Tyr152Ter |
| ENST00000382844.2:c.456C>A | ENST00000382844.2:p.Tyr152Ter |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
Pathogenic
Likely pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Likely pathogenic
|
2009-05-18 | criteria provided, single submitter | Rare genetic deafness |
germline
|
Detail |
|
Pathogenic
|
2024-01-11 | criteria provided, multiple submitters, no conflicts | not provided |
germline
|
Detail |
|
Likely pathogenic
|
2020-09-16 | criteria provided, single submitter | Autosomal recessive nonsyndromic hearing loss 1A |
germline
unknown
|
Detail |
|
Pathogenic
|
2023-12-12 | criteria provided, single submitter | Autosomal recessive nonsyndromic hearing loss 1A |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.440 | DEAFNESS, AUTOSOMAL RECESSIVE 1A (disorder) | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_004004.6(GJB2):c.456C>A (p.Tyr152Ter) AND Rare genetic deafness | ClinVar | Detail |
| NM_004004.6(GJB2):c.456C>A (p.Tyr152Ter) AND not provided | ClinVar | Detail |
| NM_004004.6(GJB2):c.456C>A (p.Tyr152Ter) AND Autosomal recessive nonsyndromic hearing loss 1A | ClinVar | Detail |
| NM_004004.6(GJB2):c.456C>A (p.Tyr152Ter) AND Autosomal recessive nonsyndromic hearing loss 1A | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs111033420 dbSNP
- Genome
- hg19
- Position
- chr13:20,763,265-20,763,265
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- T
Genome browser