chr11:5248388:G>T Detail (hg19) (HBB, LOC106099062, LOC107133510)

Information

Genome

Assembly Position
hg19 chr11:5,248,388-5,248,388
hg38 chr11:5,227,158-5,227,158 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq
Ensemble ENST00000647020.1:c.-137C>A
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic Likely pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 141900 OMIM
HGNC 4827 HGNC
Ensembl ENSG00000244734 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Likely pathogenic 2018-04-09 criteria provided, single submitter beta thalassemia germline unknown Detail
Pathogenic 2024-01-02 criteria provided, multiple submitters, no conflicts not provided germline Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2018-10-31 criteria provided, single submitter alpha thalassemia,Fetal hemoglobin quantitative trait locus 1,Malaria, susceptibility to,Dominant beta-thalassemia,Erythrocytosis, familial, 6,Methemoglobinemia, beta-globin type,Hb SS disease,beta thalassemia,Heinz body anemia unknown Detail
Pathogenic 2021-11-24 criteria provided, single submitter Beta thalassemia intermedia germline Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
Pathogenic 2021-12-09 criteria provided, single submitter alpha thalassemia,Malaria, susceptibility to,Hereditary persistence of fetal hemoglobin,Methemoglobinemia, beta-globin type,Erythrocytosis, familial, 6,Hb SS disease,Dominant beta-thalassemia,Beta-thalassemia HBB/LCRB,Heinz body anemia unknown Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.244 Beta thalassemia intermedia NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000518.5(HBB):c.-137C>A AND beta Thalassemia ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND not provided ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND Beta thalassemia intermedia ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-137C>A AND multiple conditions ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs33941377 dbSNP
Genome
hg19
Position
chr11:5,248,388-5,248,388
Variant Type
snv
Reference Allele
G
Alternative Allele
T
Genome browser