chr11:5248330:T>C Detail (hg19) (HBB, LOC106099062, LOC107133510)

Information

Genome

Assembly Position
hg19 chr11:5,248,330-5,248,330
hg38 chr11:5,227,100-5,227,100 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq
Ensemble ENST00000647020.1:c.-79A>G
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 141900 OMIM
HGNC 4827 HGNC
Ensembl ENSG00000244734 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 1986-10-01 no assertion criteria provided Beta-plus-thalassemia germline Detail
Pathogenic 2019-10-18 criteria provided, multiple submitters, no conflicts beta thalassemia germline unknown Detail
Pathogenic 2024-01-28 criteria provided, multiple submitters, no conflicts not provided germline unknown Detail
Pathogenic 2022-05-04 criteria provided, single submitter Heinz body anemia germline Detail
Pathogenic 2016-10-05 criteria provided, single submitter Inborn genetic diseases germline Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
Pathogenic 2022-04-02 criteria provided, single submitter Heinz body anemia,Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Malaria, susceptibility to,Hb SS disease,Beta-thalassemia HBB/LCRB unknown Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.287 alpha-Thalassemia NA CLINVAR Detail
0.244 Beta thalassemia intermedia NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000518.5(HBB):c.-79A>G AND Beta-plus-thalassemia ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND beta Thalassemia ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND not provided ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND Heinz body anemia ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND Inborn genetic diseases ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.-79A>G AND multiple conditions ClinVar Detail
NA DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs34598529 dbSNP
Genome
hg19
Position
chr11:5,248,330-5,248,330
Variant Type
snv
Reference Allele
T
Alternative Allele
C
Genome browser