chr11:5247062:G>C Detail (hg19) (HBB, LOC107133510, LOC110006319)

Information

Genome

Assembly Position
hg19 chr11:5,247,062-5,247,062
hg38 chr11:5,225,832-5,225,832 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_000518.4:c.316-106C>G
Ensemble ENST00000647020.1:c.316-106C>G
ENST00000335295.4:c.316-106C>G
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 141900 OMIM
HGNC 4827 HGNC
Ensembl ENSG00000244734 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 1982-04-15 no assertion criteria provided Beta-plus-thalassemia germline Detail
Pathogenic 2019-12-09 criteria provided, multiple submitters, no conflicts beta thalassemia germline unknown Detail
Pathogenic 2024-01-06 criteria provided, multiple submitters, no conflicts not provided germline unknown Detail
Pathogenic criteria provided, single submitter Hb SS disease germline Detail
Pathogenic 2020-02-21 criteria provided, single submitter Dominant beta-thalassemia germline Detail
Pathogenic 2022-08-05 criteria provided, single submitter Beta-thalassemia HBB/LCRB germline Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
Pathogenic 2022-04-26 criteria provided, single submitter Methemoglobinemia, beta-globin type,Dominant beta-thalassemia,Heinz body anemia,Beta-thalassemia HBB/LCRB,Erythrocytosis, familial, 6,alpha thalassemia,Hereditary persistence of fetal hemoglobin,Hb SS disease,Malaria, susceptibility to unknown Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.287 alpha-Thalassemia NA CLINVAR Detail
0.672 beta thalassemia NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000518.5(HBB):c.316-106C>G AND Beta-plus-thalassemia ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND beta Thalassemia ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND not provided ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND Hb SS disease ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND Dominant beta-thalassemia ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND Beta-thalassemia HBB/LCRB ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NM_000518.5(HBB):c.316-106C>G AND multiple conditions ClinVar Detail
NA DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs34690599 dbSNP
Genome
hg19
Position
chr11:5,247,062-5,247,062
Variant Type
snv
Reference Allele
G
Alternative Allele
C
Genome browser