chr10:69643342:T>C Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr10:69,643,342-69,643,342 |
| hg38 | chr10:67,883,584-67,883,584 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.179 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Metabolic syndrome X | Nominally significant associations were also observed between T2D and the SIRT1 ... | BeFree | 20503258 | Detail |
| 0.211 | Diabetes Mellitus, Non-Insulin-Dependent | Nominally significant associations were also observed between T2D and the SIRT1 ... | BeFree | 20503258 | Detail |
| 0.204 | Metabolic syndrome X | Nominally significant associations were also observed between T2D and the SIRT1 ... | BeFree | 20503258 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Nominally significant associations were also observed between T2D and the SIRT1 rs3758391 SNP and MS... | DisGeNET | Detail |
| Nominally significant associations were also observed between T2D and the SIRT1 rs3758391 SNP and MS... | DisGeNET | Detail |
| Nominally significant associations were also observed between T2D and the SIRT1 rs3758391 SNP and MS... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs3758391 dbSNP
- Genome
- hg19
- Position
- chr10:69,643,342-69,643,342
- Variant Type
- snv
- Reference Allele
- T
- Alternative Allele
- C
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs3758391
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.1792
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 3003
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
Genome browser