chr10:51568377:A>C Detail (hg19) (NCOA4)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr10:51,568,377-51,568,377
hg38	chr10:46,027,444-46,027,444

HGVS

NCOA4

Type	Transcript	Protein
RefSeq	NM_001145260.1:c.21A>C	NP_001138732.1:p.Thr7=
	NM_001145261.1:c.-15+3081A>C
	NM_001145263.1:c.-15+3081A>C
Ensemble	ENST00000578454.5:c.21A>C	ENST00000578454.5:p.Thr7=
	ENST00000581486.6:c.-15+3081A>C
	ENST00000585056.5:c.-71+3081A>C
	ENST00000579039.2:c.21A>C	ENST00000579039.2:p.Thr7=
	ENST00000580070.5:c.-128+3081A>C

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance
Review star	[No Data.]
Show details

Links

NCOA4

Type	Database	ID	Link
Gene	MIM	601984	OMIM
	HGNC	7671	HGNC
	Ensembl	ENSG00000266412	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

[No Data.]

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.256	Malignant neoplasm of prostate	Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4,...	BeFree	20717903	Detail
0.003	prostate carcinoma	Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4,...	BeFree	20717903	Detail
0.005	Malignant neoplasm of prostate	Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4,...	BeFree	20717903	Detail
0.011	prostate carcinoma	Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4,...	BeFree	20717903	Detail

Annotation

Annotations

Descrption	Source	Links
Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4, a SNP that has been...	DisGeNET	Detail
Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4, a SNP that has been...	DisGeNET	Detail
Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4, a SNP that has been...	DisGeNET	Detail
Of note, rs7000448 is in strong linkage disequilibrium with rs10761581 in NCOA4, a SNP that has been...	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs10761581 dbSNP
Genome: hg19
Position: chr10:51,568,377-51,568,377
Variant Type: snv
Reference Allele: A
Alternative Allele: C

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