chr1:59042827:A>C Detail (hg19) (TACSTD2)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr1:59,042,827-59,042,827 |
| hg38 | chr1:58,577,155-58,577,155 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_002353.2:c.2T>G | NP_002344.2:p.? |
| Ensemble | ENST00000371225.4:c.2T>G | ENST00000371225.4:p.? |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
Pathogenic
|
2002-06-01 | no assertion criteria provided | Lattice corneal dystrophy Type III |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.365 | Corneal dystrophy, Lattice type 3 | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_002353.3(TACSTD2):c.2T>G (p.Met1Arg) AND Lattice corneal dystrophy Type III | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs80358226 dbSNP
- Genome
- hg19
- Position
- chr1:59,042,827-59,042,827
- Variant Type
- snv
- Reference Allele
- A
- Alternative Allele
- C
Genome browser