chr19:1221320:G> Detail (hg19) (STK11)

Information

Genome

Assembly Position
hg19 chr19:1,221,320-1,221,320
hg38 chr19:1,221,321-1,221,321 

HGVS

Type Transcript Protein
RefSeq NM_000455.4:c.843delG NP_000446.1:p.Leu282SerfsTer5
Ensemble ENST00000326873.12:c.843delG ENST00000326873.12:p.Leu282SerfsTer5
ENST00000585465.3:c.843delG ENST00000585465.3:p.Leu282SerfsTer5
Summary

MGeND

Clinical significance not provided
Variant entry 2
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 602216 OMIM
HGNC 11389 HGNC
Ensembl ENSG00000118046 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC COSM6919060 COSMIC
MONDO
Disease area statistics
MGeND
Clinical significance Last evaluated Condition Origin Submission ID Submitter Institute Citation Comment Image
not provided extrahepatic bile duct not provided MGS000042
(TMGS000093) 		Hitoshi Nakagama National Cancer Center Japan
not provided bronchus or lung, unspecified not provided MGS000042
(TMGS000093) 		Hitoshi Nakagama National Cancer Center Japan
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 1998-01-01 no assertion criteria provided Peutz-Jeghers syndrome germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.664 Peutz-Jeghers syndrome NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000455.5(STK11):c.843del (p.Leu282fs) AND Peutz-Jeghers syndrome ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs587776656 dbSNP
Genome
hg19
Position
chr19:1,221,320-1,221,320
Variant Type
snv
Reference Allele
G
Alternative Allele
-
Genome browser