chr1:94505652:GAGAAACCCTTAGACG> Detail (hg19) (ABCA4)

Information

Genome

Assembly Position
hg19 chr1:94,505,652-94,505,667
hg38 chr1:94,040,096-94,040,111 

HGVS

Type Transcript Protein
RefSeq NM_000350.2:c.3539_3554delCGTCTAAGGGTTTCTC NP_000341.2:p.Ser1181ProfsTer10
Ensemble ENST00000370225.4:c.3539_3554delCGTCTAAGGGTTTCTC ENST00000370225.4:p.Ser1181ProfsTer10
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 601691 OMIM
HGNC 34 HGNC
Ensembl ENSG00000198691 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 2008-07-01 no assertion criteria provided cone-rod dystrophy 3 germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.440 CONE-ROD DYSTROPHY 3 (disorder) NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000350.3(ABCA4):c.3540_3555del (p.Ser1181fs) AND Cone-rod dystrophy 3 ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs387906388 dbSNP
Genome
hg19
Position
chr1:94,505,652-94,505,667
Variant Type
snv
Reference Allele
GAGAAACCCTTAGACG
Alternative Allele
-
Genome browser