A*31:01 Allile
Information
- HLA Labo Frequency
- 8.62% (n=31,755)
| Study Name | Sub Study Name | Description | Phenotype | Region | Typing Method | Algorithm | Typing Kit | Sequencing Library Strategy | Platform | Ipd Imgt Hla Version | Group Name A | Sample Number Group A | Group A Count | Group Name B | Sample Number Group B | Group B Count | Test Method | Submission ID | Citation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HLA healthy data | HLA allele frequencies in healthy Japanese | none (healthy) | Mainland Japan | Luminex | Wakunaga and One Lambda | 345 (7.82%) | MGS000004 |
24781922
27091392 28894202 |
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| HLA_HBV-815_Healthy-2281 | HBV Patients | 815 | 164 (10.06%) | Healthy Control | 2,281 | 379 (8.31%) | X^2 | MGS000003 | |||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_CD4_less_200_ | Luminex | sample | 448 | 29 (6.47%) | MGS000007 | |||||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_CD4_greater_or_equal_200_ | Luminex | sample | 448 | 15 (3.35%) | MGS000007 | |||||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_CD4_less_400_ | Luminex | sample | 448 | 17 (3.79%) | MGS000007 | |||||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_CD4_greater_or_equal_400_ | Luminex | sample | 448 | 27 (6.03%) | MGS000007 | |||||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_RNA_copy_less_10000_ | Luminex | sample | 450 | 29 (6.44%) | MGS000007 | |||||||||||||
| establishment_of_clinical_genome_data_storage_on_hiv_infected_individuals | HIV_RNA_copy_greater_or_equal_10000_ | Luminex | sample | 450 | 15 (3.33%) | MGS000007 | |||||||||||||
| HLA allele frequencies in ATL Kyushu Area | List of HLA allele frequencies in ATL Kyushu Area | ATL | Kyushu Area | NGS-based | HLA-HD | - | Target sequence | MiSeq | 3.15.0 | 112 | 10 (8.93%) | MGS000012 | |||||||
| HLA allele frequencies in HAM Kyushu Area | List of HLA allele frequencies in HAM Kyushu Area | HAM | Kyushu Area | NGS-based | HLA-HD | - | Target sequence / WGS | MiSeq / HiSeq | 3.15.0 | 1,386 | 134 (9.67%) | MGS000012 | |||||||
| HLA allele frequencies in HTLV-1 carrier Goto cohort | List of HLA allele frequencies in HTLV-1 carrier Goto cohort | HTLV-1 carrier | Goto cohort | NGS-based | HLA-HD | - | Target sequence | MiSeq | 3.15.0 | 974 | 75 (7.70%) | MGS000012 | |||||||
| HLA allele frequencies in HTLV-1 carrier Kyushu Area | List of HLA allele frequencies in HTLV-1 carrier Kyushu Area | HTLV-1 carrier | Kyushu Area | NGS-based | HLA-HD | - | Target sequence / WGS | MiSeq / HiSeq | 3.15.0 | 3,476 | 280 (8.06%) | MGS000012 | |||||||
| HLA allele frequencies in Uninfected Goto cohort | List of HLA allele frequencies in Uninfected Goto cohort | Uninfected | Goto cohort | NGS-based | HLA-HD | - | Target sequence | MiSeq | 3.15.0 | 5,050 | 404 (8.00%) | MGS000012 | |||||||
| HLA allele frequencies in Uninfected Whole of Japan | List of HLA allele frequencies in Uninfected Whole of Japan | Uninfected | Whole of Japan | NGS-based | HLA-HD | - | WGS | HiSeq | 3.15.0 | 3,558 | 265 (7.45%) | MGS000012 | |||||||
| HTLV-1 carrier vs Uninfected (Goto) | Test result of HTLV-1 carrier vs Uninfected (Goto) | HTLV-1 carrier / Uninfected | Kyushu Area / Goto cohort | NGS-based | HLA-HD | - | Target sequence / WGS | MiSeq / HiSeq | 3.15.0 | HTLV-1 Carrier | 4,450 | 355 (7.98%) | Goto Uninfected | 5,050 | 404 (8.00%) | MGS000012 | |||
| HTLV-1 carrier (Goto) vs Uninfected (Goto) | Test result of HTLV-1 carrier (Goto) vs Uninfected (Goto) | HTLV-1 carrier / Uninfected | Goto cohort | NGS-based | HLA-HD | - | Target sequence | MiSeq | 3.15.0 | Goto HTLV-1 Carrier | 974 | 75 (7.70%) | Goto Uninfected | 5,050 | 404 (8.00%) | MGS000012 | |||
| HAM vs HTLV-1 carrier | Test result of HAM vs HTLV-1 carrier | HAM / HTLV-1 carrier | Kyushu Area / Goto cohort | NGS-based | HLA-HD | - | Target sequence / WGS | MiSeq / HiSeq | 3.15.0 | HAM/TSP | 1,386 | 134 (9.67%) | HTLV-1 Carrier | 4,450 | 355 (7.98%) | MGS000012 | |||
| Kyushu vs Whole of Japan | Test result of Kyushu vs Whole of Japan | HAM / HTLV-1 carrier / Uninfected | Kyushu Area / Goto cohort / Whole of Japan | NGS-based | HLA-HD | - | Target sequence / WGS | MiSeq / HiSeq | 3.15.0 | Kyushu | 10,886 | 893 (8.20%) | Whole of Japan | 3,558 | 265 (7.45%) | MGS000012 |