ENST00000680506.1 CCL25
Information
- Transcript ID
- ENST00000680506.1
- Genome
- hg38
- Position
- chr19:8,052,375-8,062,660
- Strand
- +
- CDS length
- 453
- Amino acid length
- 151
- Gene symbol
- CCL25
- Gene type
- protein-coding
- Gene description
- C-C motif chemokine ligand 25
- Gene Entrez Gene ID
- 6370
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 8,052,375 | 8,052,510 |
| 2 | 8,052,764 | 8,052,822 |
| 3 | 8,053,000 | 8,053,122 |
| 4 | 8,056,152 | 8,056,269 |
| 5 | 8,056,366 | 8,056,499 |
| 6 | 8,057,801 | 8,057,920 |
| 7 | 8,062,218 | 8,062,660 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 8,053,050 | 8,053,122 |
| 4 | CDS | 8,056,152 | 8,056,269 |
| 5 | CDS | 8,056,366 | 8,056,499 |
| 6 | CDS | 8,057,801 | 8,057,920 |
| 7 | CDS | 8,062,218 | 8,062,225 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 8,117,259 | 8,127,544 | Link |
CDS sequence
ATGAACCTGTGGCTCCTGGCCTGCCTGGTGGCCGGCTTCCTGGGAGCCTGGGCCCCCGCTGTCCACACCCAAGGTGTCTTTGAGGACTGCTGCCTGGCCTACCACTACCCCATTGGGTGGGCTGTGCTCCGGCGCGCCTGGACTTACCGGATCCAGGAGGTGAGCGGGAGCTGCAATCTGCCTGCTGCGATATTCTACCTCCCCAAGAGACACAGGAAGGTGTGTGGGAACCCCAAAAGCAGGGAGGTGCAGAGAGCCATGAAGCTCCTGGATGCTCGAAATAAGGTTTTTGCAAAGCTCCACCACAACACGCAGACCTTCCAAGCAGGCCCTCATGCTGTAAAGAAGTTGAGTTCTGGAAACTCCAAGTTATCATCGTCCAAGTTTAGCAATCCCATCAGCAGCAGTAAGAGGAATGTCTCCCTCCTGATATCAGCTAATTCAGGACTGTGA
Amino sequence
MNLWLLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSGNSKLSSSKFSNPISSSKRNVSLLISANSGL*