ENST00000298815.13 ARHGAP42

Information
Transcript ID
ENST00000298815.13
Genome
hg38
Position
chr11:100,687,288-100,993,941
Strand
+
CDS length
2,625
Amino acid length
875
Gene symbol
ARHGAP42
Gene type
protein-coding
Gene description
Rho GTPase activating protein 42
Gene Entrez Gene ID
143872
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 100,687,288 100,687,832
2 100,770,343 100,770,438
3 100,795,105 100,795,166
4 100,859,554 100,859,625
5 100,913,452 100,913,553
6 100,921,494 100,921,604
7 100,933,156 100,933,260
8 100,936,203 100,936,332
9 100,941,784 100,941,884
10 100,943,759 100,943,868
11 100,948,457 100,948,535
12 100,949,917 100,949,956
13 100,959,883 100,959,945
14 100,960,915 100,960,989
15 100,961,684 100,961,768
16 100,962,409 100,962,467
17 100,965,671 100,965,776
18 100,973,175 100,973,334
19 100,974,459 100,974,603
20 100,976,057 100,976,437
21 100,976,815 100,976,971
22 100,978,987 100,979,049
23 100,987,513 100,987,592
24 100,988,713 100,993,941
CDS
Exon number Type Start Stop
1 CDS 100,687,679 100,687,832
2 CDS 100,770,343 100,770,438
3 CDS 100,795,105 100,795,166
4 CDS 100,859,554 100,859,625
5 CDS 100,913,452 100,913,553
6 CDS 100,921,494 100,921,604
7 CDS 100,933,156 100,933,260
8 CDS 100,936,203 100,936,332
9 CDS 100,941,784 100,941,884
10 CDS 100,943,759 100,943,868
11 CDS 100,948,457 100,948,535
12 CDS 100,949,917 100,949,956
13 CDS 100,959,883 100,959,945
14 CDS 100,960,915 100,960,989
15 CDS 100,961,684 100,961,768
16 CDS 100,962,409 100,962,467
17 CDS 100,965,671 100,965,776
18 CDS 100,973,175 100,973,334
19 CDS 100,974,459 100,974,603
20 CDS 100,976,057 100,976,437
21 CDS 100,976,815 100,976,971
22 CDS 100,978,987 100,979,049
23 CDS 100,987,513 100,987,592
24 CDS 100,988,713 100,988,801
Other genome
Genome Chromosome Start End Links
hg19 chr11 100,558,019 100,864,672 Link
CDS sequence
ATGGGGCTGCCCACTCTGGAGTTCAGCGATTCCTACTTGGACAGCCCAGATTTCAGGGAGCGCTTGCAGTGTCACGAGATTGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTCATTAAGGACGGCTCTCTGCTCATTGGGGCGTTGAGGAATCTGTCTATGGCAGTGCAGAAATTTTCCCAGTCATTGCAAGATTTCCAGTTTGAATGTATTGGTGATGCTGAAACAGATGATGAAATTAGTATTGCTCAGTCACTAAAAGAATTTGCAAGACTACTCATTGCAGTAGAAGAAGAAAGGCGAAGACTGATCCAAAACGCTAACGATGTATTAATTGCACCACTTGAGAAATTTCGAAAAGAACAGATAGGTGCAGCAAAAGATGGAAAGAAGAAGTTTGACAAAGAGAGTGAAAAATATTACTCTATCCTTGAAAAGCATTTAAATTTGTCCGCAAAGAAAAAGGAGTCTCATTTACAAGAGGCAGATACACAAATTGACCGAGAACATCAGAACTTCTATGAAGCATCATTAGAATATGTCTTTAAAATTCAAGAGGTCCAAGAAAAAAAGAAGTTTGAATTTGTTGAACCGCTTTTGTCATTTCTTCAGGGCTTATTTACTTTTTACCATGAGGGATATGAACTTGCCCAGGAATTTGCACCGTATAAGCAACAGCTGCAGTTCAACTTGCAGAATACAAGGAATAATTTTGAAAGTACTCGACAAGAGGTAGAGCGGTTGATGCAAAGGATGAAATCTGCTAACCAGGACTACAGACCACCCAGCCAGTGGACGATGGAAGGCTATCTGTATGTCCAGGAGAAACGACCGCTTGGTTTTACATGGATTAAACATTATTGTACATATGATAAGGGAAGTAAAACATTTACAATGAGTGTTTCAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCGGAAATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGACAAACGATTCTGCTTTGACATAGAAGTAGTTGAAAGGCATGGGATCATCACGTTACAGGCCTTCTCAGAAGCTAATAGGAAACTCTGGCTTGAAGCCATGGATGGGAAGGAACCGATTTATACTCTGCCTGCCATTATAAGCAAGAAAGAAGAAATGTATTTGAATGAAGCAGGGTTCAACTTTGTGAGAAAATGCATTCAAGCTGTGGAAACAAGAGGTATCACCATTTTAGGACTCTACCGAATAGGAGGAGTGAACTCCAAAGTTCAAAAACTCATGAATACCACATTTTCTCCTAAATCCCCTCCTGATATTGATATTGATATTGAACTGTGGGACAATAAGACGATAACAAGTGGGCTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAGTTGCACAAAGATTTTATCATTGCTGTTAAATCTGATGATCAAAACTACAGGGTGGAGGCTGTACATGCATTGGTGCACAAATTGCCGGAGAAAAACAGAGAGATGCTGGACATCTTAATAAAGCATCTGGTCAAAGTATCACTACACAGCCAACAAAATCTCATGACTGTCTCAAATCTTGGTGTCATATTTGGCCCAACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCTATGATGAATATTAAATTTCAGAATATTGTGGTAGAAATTCTGATAGAGCACTATGAAAAGATTTTTCATACTGCTCCAGACCCAAGCATTCCTCTTCCTCAGCCTCAGTCTCGATCTGGATCCCGAAGGACACGAGCAATCTGCCTCTCTACAGGGTCTAGGAAGCCCAGAGGGAGGTATACTCCATGCCTGGCCGAACCTGATAGTGACTCCTATAGCAGCAGCCCAGACAGCACACCTATGGGGAGCATTGAGTCACTCTCTTCTCATTCCTCTGAACAAAATAGCACTACAAAGTCAGCTTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCAACCCCATCATCTTCCAATGGACAGAAAAGCCTTGGTCTGTGGACAACTAGTCCTGAATCAAGTTCCAGAGAAGATGCAACCAAGACAGATGCAGAATCAGACTGCCAGAGTGTTGCTTCAGTCACTAGCCCAGGAGACGTTTCCCCACCCATAGACCTAGTCAAGAAAGAGCCTTATGGGCTTTCAGGACTGAAAAGAGCTTCTGCTTCTTCTCTCAGATCCATCTCTGCAGCTGAAGGAAACAAGAGCTACAGTGGATCTATTCAAAGCTTAACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCACCAAACCCAGACCTGCCTCCGAAAATGTGCAGGAGATTAAGACTAGACACTGCCTCAAGCAATGGCTATCAGCGGCCTGGCTCAGTAGTGGCAGCAAAAGCTCAACTGTTTGAAAATGTTGGTTCACCTAAACCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTGTAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCAATATTTTCTAATGTGTACCCATCAGTGGAACCAGGATGGTTAAAGGCAACTTATGAAGGCAAAACAGGACTAGTTCCAGAAAATTATGTTGTCTTCCTCTAA
Amino sequence
MGLPTLEFSDSYLDSPDFRERLQCHEIELERTNKFIKELIKDGSLLIGALRNLSMAVQKFSQSLQDFQFECIGDAETDDEISIAQSLKEFARLLIAVEEERRRLIQNANDVLIAPLEKFRKEQIGAAKDGKKKFDKESEKYYSILEKHLNLSAKKKESHLQEADTQIDREHQNFYEASLEYVFKIQEVQEKKKFEFVEPLLSFLQGLFTFYHEGYELAQEFAPYKQQLQFNLQNTRNNFESTRQEVERLMQRMKSANQDYRPPSQWTMEGYLYVQEKRPLGFTWIKHYCTYDKGSKTFTMSVSEMKSSGKMNGLVTSSPEMFKLKSCIRRKTDSIDKRFCFDIEVVERHGIITLQAFSEANRKLWLEAMDGKEPIYTLPAIISKKEEMYLNEAGFNFVRKCIQAVETRGITILGLYRIGGVNSKVQKLMNTTFSPKSPPDIDIDIELWDNKTITSGLKNYLRCLAEPLMTYKLHKDFIIAVKSDDQNYRVEAVHALVHKLPEKNREMLDILIKHLVKVSLHSQQNLMTVSNLGVIFGPTLMRAQEETVAAMMNIKFQNIVVEILIEHYEKIFHTAPDPSIPLPQPQSRSGSRRTRAICLSTGSRKPRGRYTPCLAEPDSDSYSSSPDSTPMGSIESLSSHSSEQNSTTKSASCQPREKSGGIPWIATPSSSNGQKSLGLWTTSPESSSREDATKTDAESDCQSVASVTSPGDVSPPIDLVKKEPYGLSGLKRASASSLRSISAAEGNKSYSGSIQSLTSVGSKETPKASPNPDLPPKMCRRLRLDTASSNGYQRPGSVVAAKAQLFENVGSPKPVSSGRQAKAMYSCKAEHSHELSFPQGAIFSNVYPSVEPGWLKATYEGKTGLVPENYVVFL*