ENST00000578985.5 IFT20

Information
Transcript ID
ENST00000578985.5
Genome
hg38
Position
chr17:28,328,999-28,335,440
Strand
-
CDS length
399
Amino acid length
133
Gene symbol
IFT20
Gene type
protein-coding
Gene description
intraflagellar transport 20
Gene Entrez Gene ID
90410
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 28,328,999 28,329,276
4 28,330,443 28,330,528
3 28,331,859 28,331,987
2 28,332,146 28,332,382
1 28,335,340 28,335,440
CDS
Exon number Type Start Stop
5 CDS 28,329,169 28,329,276
4 CDS 28,330,443 28,330,528
3 CDS 28,331,859 28,331,987
2 CDS 28,332,146 28,332,221
Other genome
Genome Chromosome Start End Links
hg19 chr17 26,656,025 26,662,466 Link
CDS sequence
ATGACACACCTCCTCCTGACTGCCACTGTCACTCCTTCAGAGCAGAACTCCTCTAGGGAACCTGGATGGGAAACAGCCATGGCCAAGGACATCCTGGGTGAAGCAGGGCTACACTTTGATGAACTGAACAAGCTGAGGGTGTTGGACCCAGAGGTTACCCAGCAGACCATAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGGTTTAATTGAGCTTGTTGATCAACTTGCAAAAGAAGCAGAAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACTTGCTCAAATCTATAGCAAAGCAGAGAGAAGCTCAACAGCAGCAACTTCAAGCCCTAATAGCAGAAAAGAAAATGCAGCTAGAAAGGTAA
Amino sequence
MTHLLLTATVTPSEQNSSREPGWETAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLER*