ENST00000316401.11 SIGLECL1
Information
- Transcript ID
- ENST00000316401.11
- Genome
- hg38
- Position
- chr19:51,257,710-51,269,330
- Strand
- +
- CDS length
- 594
- Amino acid length
- 198
- Gene symbol
- SIGLECL1
- Gene type
- protein-coding
- Gene description
- SIGLEC family like 1
- Gene Entrez Gene ID
- 284369
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 51,257,710 | 51,257,900 |
| 2 | 51,263,883 | 51,264,094 |
| 3 | 51,265,368 | 51,265,649 |
| 4 | 51,265,777 | 51,265,882 |
| 5 | 51,267,373 | 51,267,529 |
| 6 | 51,268,571 | 51,269,330 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 51,264,073 | 51,264,094 |
| 3 | CDS | 51,265,368 | 51,265,649 |
| 4 | CDS | 51,265,777 | 51,265,882 |
| 5 | CDS | 51,267,373 | 51,267,529 |
| 6 | CDS | 51,268,571 | 51,268,597 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 51,760,964 | 51,772,584 | Link |
CDS sequence
ATGCTTCCACTGCTACAGCTGGTACCTGCTAAGCTGCTCAACTCCTCTTGCTCCTTGGAGAAGACACTGCAGTGCAGCTGTTCCTTCCATGGGATTCCCACACCCTCTGTGCAGTGGTGGATGGGAGGAGTCCCCGTGGGTGTGGATGGCATGGATGGCAGCCTCCAAGTGACTTCCACCATGCTTGGCCCCTGGGCTAACAGCACCATCAGCCTAACTGAAGAGCCAGAAATGGGCATGAGACTTCTCTGTGAGGGGAAGAACCAAAACGGAACCCATGCTTTGAGCATCCTACTGATGTCAAGAAAGAGTTCTTTGGCTGCCCAGGCCTTCGTGAAAGGGCTGATCCAGGGTGCTATCTATGCGGGAATTGTAATTGCGCTGCTCTTCCTCTGCCTCCTCCCTCTCATAGTGAAACATATCAGAAAGAAGCAGGCGAAGAAAGCTGCAGCGATCAGAGCAAAAAAGAGCTCTAAAGTCAGAGCAAGCCAAGAACTTGAGATGTCTCTGAAGCCTGAGGAACCAGGAAAACCCGTAGTCGCCACATTTTCTGAGAGCCGGATATTGGAAAAGCAAGATAAACGAGCCAGCTAA
Amino sequence
MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEEPGKPVVATFSESRILEKQDKRAS*