ENST00000261318.5 SPRING1
Information
- Transcript ID
- ENST00000261318.5
- Genome
- hg38
- Position
- chr12:116,710,171-116,738,069
- Strand
- -
- CDS length
- 618
- Amino acid length
- 206
- Gene symbol
- SPRING1
- Gene type
- protein-coding
- Gene description
- SREBF pathway regulator in golgi 1
- Gene Entrez Gene ID
- 79794
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 116,710,171 | 116,717,893 |
| 4 | 116,719,763 | 116,719,876 |
| 3 | 116,720,296 | 116,720,447 |
| 2 | 116,723,067 | 116,723,223 |
| 1 | 116,737,790 | 116,738,069 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 116,717,810 | 116,717,893 |
| 4 | CDS | 116,719,763 | 116,719,876 |
| 3 | CDS | 116,720,296 | 116,720,447 |
| 2 | CDS | 116,723,067 | 116,723,223 |
| 1 | CDS | 116,737,790 | 116,737,900 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 117,147,976 | 117,175,874 | Link |
CDS sequence
ATGGTGAACCTGGCGGCCATGGTGTGGCGCCGGCTTCTGCGGAAGAGGTGGGTGCTCGCCCTGGTCTTCGGGCTGTCGCTCGTCTACTTCCTCAGCAGCACCTTCAAGCAGGAGGAGAGGGCAGTGAGAGATAGGAATCTCCTCCAGGTTCATGACCATAATCAGCCCATCCCGTGGAAAGTGCAGTTTAACTTGGGCAATAGCAGTCGTCCGAGCAATCAGTGCCGCAACTCCATTCAAGGGAAGCACCTCATCACGGATGAACTCGGCTACGTTTGCGAGAGGAAGGATTTGCTGGTAAATGGCTGCTGTAATGTCAACGTCCCTAGCACGAAGCAGTACTGCTGTGATGGCTGCTGGCCCAACGGCTGCTGCAGCGCCTATGAGTACTGTGTCTCCTGCTGCCTGCAGCCCAACAAGCAACTTCTCCTGGAGCGCTTCCTCAACCGGGCAGCCGTGGCATTCCAGAACCTCTTCATGGCAGTCGAAGATCACTTTGAGTTGTGCCTGGCCAAATGCAGGACCTCATCTCAGAGCGTGCAGCATGAGAACACCTACCGGGACCCCATAGCAAAGTATTGCTATGGAGAAAGCCCGCCCGAGCTCTTCCCCGCTTGA
Amino sequence
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQEERAVRDRNLLQVHDHNQPIPWKVQFNLGNSSRPSNQCRNSIQGKHLITDELGYVCERKDLLVNGCCNVNVPSTKQYCCDGCWPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAKYCYGESPPELFPA*