ENST00000425639.3 SKOR2

Information
Transcript ID
ENST00000425639.3
Genome
hg38
Position
chr18:47,206,169-47,251,660
Strand
-
CDS length
3,048
Amino acid length
1,016
Gene symbol
SKOR2
Gene type
protein-coding
Gene description
SKI family transcriptional corepressor 2
Gene Entrez Gene ID
652991
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 47,206,169 47,206,892
8 47,212,086 47,212,151
7 47,219,943 47,220,010
6 47,230,459 47,230,557
5 47,230,935 47,231,000
4 47,244,908 47,244,982
3 47,245,498 47,245,561
2 47,246,571 47,249,230
1 47,251,374 47,251,660
CDS
Exon number Type Start Stop
8 CDS 47,212,089 47,212,151
7 CDS 47,219,943 47,220,010
6 CDS 47,230,459 47,230,557
5 CDS 47,230,935 47,231,000
4 CDS 47,244,908 47,244,982
3 CDS 47,245,498 47,245,561
2 CDS 47,246,571 47,249,183
Other genome
Genome Chromosome Start End Links
hg19 chr18 44,732,540 44,778,031 Link
CDS sequence
ATGGCTTCCAGTCCGCTGCCAGGGCCCAACGACATCCTGCTGGCGTCGCCGTCGAGCGCCTTCCAGCCCGACACGCTGAGCCAGCCGCGGCCAGGGCACGCCAACCTCAAACCCAACCAGGTGGGCCAGGTGATCCTCTACGGCATTCCCATCGTGTCGTTGGTGATCGACGGGCAAGAGCGCCTGTGCCTGGCGCAGATCTCCAACACTCTGCTCAAGAACTTCAGCTACAACGAGATCCACAACCGTCGCGTGGCACTGGGCATCACGTGTGTGCAGTGCACGCCGGTGCAACTGGAGATCCTGCGGCGTGCCGGGGCCATGCCCATCTCATCGCGCCGCTGCGGCATGATCACCAAACGCGAGGCCGAGCGTCTGTGCAAGTCGTTCCTGGGCGAAAACAGGCCGCCCAAGCTGCCAGACAATTTCGCCTTCGACGTGTCACACGAGTGCGCCTGGGGCTGCCGCGGCAGCTTCATTCCCGCGCGCTACAACAGCTCGCGCGCCAAGTGCATCAAATGCAGCTACTGCAACATGTACTTCTCGCCCAACAAGTTCATTTTCCACTCCCACCGCACGCCCGACGCCAAGTACACTCAGCCAGACGCAGCCAACTTCAACTCGTGGCGCCGTCATCTCAAGCTCACCGACAAGAGTCCCCAGGACGAGCTGGTCTTCGCCTGGGAGGACGTCAAGGCCATGTTCAACGGCGGCAGCCGCAAGCGCGCACTGCCCCAGCCGGGCGCGCACCCCGCCTGCCACCCGCTCAGCTCTGTGAAGGCGGCCGCCGTGGCCGCCGCGGCCGCGGTGGCCGGAGGCGGGGGTCTGCTGGGCCCCCACCTGCTGGGTGCGCCCCCGCCGCCGCCGCCGCCACCGCCGCCCTTGGCAGAGCTGGCTGGTGCCCCGCACGCCCATCACAAGCGGCCGCGCTTCGACGACGACGACGACTCCTTGCAGGAGGCCGCCGTAGTGGCCGCCGCCAGCCTCTCGGCCGCAGCCGCCAGCCTCTCTGTGGCTGCTGCTTCGGGCGGCGCGGGGACTGGTGGGGGCGGCGCTGGGGGTGGCTGTGTGGCCGGCGTGGGCGTGGGCGCGGGCGCGGGGGCGGGTGCCGGGGCAGGGGCCAAAGGCCCGCGCAGCTACCCAGTCATCCCGGTGCCCAGCAAGGGCTCGTTCGGGGGCGTCCTGCAGAAGTTCCCGGGCTGCGGCGGGCTCTTCCCGCACCCCTACACCTTCCCTGCCGCGGCCGCCGCCTTCAGCTTGTGCCATAAGAAAGAGGATGCGGGTGCCGCCGCTGAGGCCCTGGGGGGCGCGGGCGCAGGCGGCGCGGGCGCGGCGCCCAAGGCCGGCTTGTCCGGCCTCTTCTGGCCCGCGGGCCGCAAGGACGCCTTCTATCCGCCCTTCTGCATGTTCTGGCCGCCGCGGACCCCTGGCGGGCTCCCGGTGCCCACCTACCTGCAGCCCCCGCCTCAGCCGCCCTCGGCGCTAGGCTGCGCGCTAGGCGAAAGCCCGGCCCTGCTGCGCCAGGCCTTCCTGGACCTGGCTGAGCCAGGCGGTGCTGCTGGGAGCGCCGAGGCCGCGCCCCCGCCGGGGCAGCCCCCGCAGGTAGTGGCCAACGGCCCGGGCTCCGGCCCACCTCCTCCTGCCGGGGGCGCCGGCTCTCGCGACGCGCTCTTCGAGTCGCCCCCGGGCGGCAGCGGCGGGGACTGCAGCGCGGGCTCCACGCCGCCCGCGGACTCTGTGGCAGCTGCCGGGGCAGGGGCCGCGGCCGCCGGGTCTGGCCCCGCGGGCTCCCGGGTTCCGGCGCCCCACCATCCGCACCTTCTGGAGGGGCGCAAAGCGGGCGGTGGCAGCTACCACCATTCCAGCGCCTTCCGGCCAGTGGGCGGCAAGGACGACGCGGAGAGCCTGGCCAAGCTGCACGGGGCGTCGGCGGGCGCGCCCCACTCGGCCCAGACGCATCCCCACCACCATCACCACCCTCACCACCACCACCACCACCACCACCCCCCGCAGCCGCCGTCGCCGCTTCTGCTGCTGCCCCCGCAGCCCGACGAGCCGGGTTCCGAGCGCCACCACCCGGCCCCGCCGCCGCCGCCGCCGCCGCCCCCGCCGCCCCCTCTGGCCCAGCACCCGCACCACCGAGGCCTTCTGTCTCCCGGGGGAACCAGCTGCTGCTACCCCAGCGAGGACAGCTCCGAGGACGAGGACGACGAGGAAGAAGAGCAGGAGGTGGACGTGGAGGGCCACAAGCCCCCCGAGGGCGAGGAAGAGGAGGAAGGTCGAGACCCTGACGACGACGAGGAAGAGGACGAGGAGACGGAGGTCCTACTCGGCGACCCCTTAGTCGGGGGCGGCCGGTTCCTCCAGGGCCGAGGGCCGTCGGAGAAGGGGAGCAGCCGGGACCGCGCGCCGGCCGTCGCGGGCGCGTTCCCGCTCGGCCTGAACTCCTCCAGGCTGCTGCAGGAAGACGGGAAACTCGGGGACCCCGGCTCGGACCTGCCCCCGCCCCCGCCGCCGCCCCTGGCCCCCCAGAAGGCGAGTGGCGGCGGCAGCAGCAGCCCGGGCAGCCCAGTTCACCATCCATCACTGGAGGAGCAGCCCTCCTACAAAGATAGTCAGAAAACTAAGGAAAATAACCAAGTAATTGTATCTACAAAGGATGACAACAGCTTTTCAGATAAGAACAAGGAGCATAGCTTTTTCATCACAGACTCTGATGCTTCTGGAGGAGATTTTTGGAGAGAAAGATCAGGTGAACATACACAAGAAACCAACTCACCTCATTCACTGAAAAAGGATGTAGAAAATATGGGGAAAGAAGAACTTCAGAAGGTTTTATTTGAACAAATAGATTTACGGAGACGACTGGAACAAGAATTCCAGGTGTTAAAAGGAAACACATCTTTCCCAGTATTCAATAATTTTCAGGATCAGATGAAAAGGGAGCTAGCCTACCGAGAAGAAATGGTGCAACAGTTACAAATTATCCCCTATGCAGCAAGTTTGATCAGGAAAGAAAAGCTTGGCGCCCATCTCAGCAAAAGCTAA
Amino sequence
MASSPLPGPNDILLASPSSAFQPDTLSQPRPGHANLKPNQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDNFAFDVSHECAWGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRHLKLTDKSPQDELVFAWEDVKAMFNGGSRKRALPQPGAHPACHPLSSVKAAAVAAAAAVAGGGGLLGPHLLGAPPPPPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGGVLQKFPGCGGLFPHPYTFPAAAAAFSLCHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPPRTPGGLPVPTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCCYPSEDSSEDEDDEEEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEETEVLLGDPLVGGGRFLQGRGPSEKGSSRDRAPAVAGAFPLGLNSSRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDKNKEHSFFITDSDASGGDFWRERSGEHTQETNSPHSLKKDVENMGKEELQKVLFEQIDLRRRLEQEFQVLKGNTSFPVFNNFQDQMKRELAYREEMVQQLQIIPYAASLIRKEKLGAHLSKS*