ENST00000305783.13 RNFT1

Information
Transcript ID
ENST00000305783.13
Genome
hg38
Position
chr17:59,952,240-59,964,740
Strand
-
CDS length
1,308
Amino acid length
436
Gene symbol
RNFT1
Gene type
protein-coding
Gene description
ring finger protein, transmembrane 1
Gene Entrez Gene ID
51136
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 59,952,240 59,953,111
8 59,954,045 59,954,146
7 59,956,488 59,956,553
6 59,957,224 59,957,382
5 59,958,291 59,958,444
4 59,960,068 59,960,168
3 59,962,540 59,962,616
2 59,962,827 59,963,284
1 59,964,608 59,964,740
CDS
Exon number Type Start Stop
9 CDS 59,952,977 59,953,111
8 CDS 59,954,045 59,954,146
7 CDS 59,956,488 59,956,553
6 CDS 59,957,224 59,957,382
5 CDS 59,958,291 59,958,444
4 CDS 59,960,068 59,960,168
3 CDS 59,962,540 59,962,616
2 CDS 59,962,827 59,963,284
1 CDS 59,964,608 59,964,663
Other genome
Genome Chromosome Start End Links
hg19 chr17 58,029,601 58,042,101 Link
CDS sequence
ATGCCGCTGTTCTTGCTGTCGCTCCCGACACCTCCGTCCGCTTCTGGTCATGAGAGGAGACAGAGGCCTGAAGCAAAGACATCTGGGTCAGAGAAAAAGTATTTAAGGGCCATGCAAGCCAATCGTAGCCAACTGCACAGTCCTCCAGGAACTGGAAGCAGTGAGGATGCCTCAACCCCTCAGTGTGTCCACACAAGATTGACAGGAGAGGGTTCTTGCCCTCATTCTGGAGATGTTCATATCCAGATAAACTCCATACCTAAAGAATGTGCAGAAAATGCAAGCTCCAGAAATATAAGGTCAGGTGTCCATAGCTGTGCCCATGGATGTGTACACAGTCGCTTACGGGGTCACTCCCACAGTGAAGCAAGGCTGACTGATGATACTGCCGCAGAATCTGGAGATCATGGTAGTAGCTCCTTCTCAGAATTCCGCTATCTCTTCAAGTGGCTGCAAAAAAGTCTTCCATATATTTTGATTCTGAGCGTCAAACTTGTTATGCAGCATATAACAGGAATTTCTCTTGGAATTGGGCTGCTAACAACTTTTATGTATGCAAACAAAAGCATTGTAAATCAGGTTTTTCTAAGAGAAAGGTCCTCAAAGATTCAGTGTGCTTGGTTACTGGTATTCTTAGCAGGATCTTCTGTTCTTTTATATTACACCTTTCATTCTCAGTCACTTTATTACAGCTTAATTTTTTTAAATCCTACTTTGGACCATTTGAGCTTCTGGGAAGTATTTTGGATTGTTGGAATTACAGACTTCATTCTGAAATTCTTTTTCATGGGCTTAAAATGCCTTATTTTATTGGTGCCTTCTTTCATCATGCCTTTTAAATCTAAGGGTTACTGGTATATGCTTTTAGAAGAATTGTGTCAATACTACCGAACTTTTGTTCCCATACCAGTTTGGTTTCGCTACCTTATAAGCTATGGGGAGTTTGGTAACGTAACTAGATGGAGTCTTGGGATACTGCTGGCTTTACTCTACCTCATATTAAAACTTTTGGAATTTTTTGGGCATCTGAGAACTTTCAGACAGGTTTTACGAATATTTTTTACACAACCAAGTTATGGAGTGGCTGCCAGCAAGAGACAGTGTTCAGATGTGGATGATATTTGTTCAATATGTCAAGCTGAATTTCAGAAGCCAATTCTTCTCATTTGTCAGCATATATTTTGTGAAGAGTGCATGACCTTATGGTTTAACAGAGAGAAAACATGTCCACTCTGCAGAACTGTGATTTCAGACCATATAAACAAATGGAAGGATGGAGCCACTTCATCACACCTTCAAATATATTAA
Amino sequence
MPLFLLSLPTPPSASGHERRQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDVHIQINSIPKECAENASSRNIRSGVHSCAHGCVHSRLRGHSHSEARLTDDTAAESGDHGSSSFSEFRYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVISDHINKWKDGATSSHLQIY*