ENST00000328801.6 OTOP3

Information
Transcript ID
ENST00000328801.6
Genome
hg38
Position
chr17:74,935,898-74,949,992
Strand
+
CDS length
1,737
Amino acid length
579
Gene symbol
OTOP3
Gene type
protein-coding
Gene description
otopetrin 3
Gene Entrez Gene ID
347741
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 74,935,898 74,935,940
2 74,941,393 74,941,809
3 74,941,901 74,942,037
4 74,943,286 74,943,344
5 74,943,606 74,943,724
6 74,946,661 74,947,475
7 74,949,246 74,949,992
CDS
Exon number Type Start Stop
1 CDS 74,935,922 74,935,940
2 CDS 74,941,393 74,941,809
3 CDS 74,941,901 74,942,037
4 CDS 74,943,286 74,943,344
5 CDS 74,943,606 74,943,724
6 CDS 74,946,661 74,947,475
7 CDS 74,949,246 74,949,416
Other genome
Genome Chromosome Start End Links
hg19 chr17 72,931,993 72,946,087 Link
CDS sequence
ATGCCTCTCCCGGCCTCAGCCCCTGCTGAGGCTACACCCATGCCTTCTTCAGAAGCACAGGAGACTGAAGCAGCCCCGGAGAAGGAGAACCGAGTGGATGTGGGGGCCGAGGAGAGAGCGGCCGCCACCCGGCCCCGGCAGAAGTCCTGGCTGGTGAGGCATTTCTCTCTGCTGCTGCGGCGGGACCGGCAGGCCCAGAAGGCTGGACAACTCTTCTCGGGGCTCCTGGCCCTGAATGTGGTGTTCCTGGGTGGCGCCTTCATCTGCAGCATGATCTTCAACAAGGTGGCCGTCACTCTGGGTGACGTGTGGATCCTGCTGGCCACGCTGAAGGTCCTCTCCCTGCTTTGGCTTCTCTACTATGTGGCAAGCACCACCCGCCGACCACACGCCGTGCTCTACCAAGATCCCCACGCGGGGCCCCTCTGGGTGCGGGGTTCCCTAGTGCTCTTCGGCAGCTGCACCTTCTGCCTCAACATCTTCCGAGTGGGCTACGATGTGAGCCACATCCGCTGCAAGTCACAGCTGGACCTTGTCTTCTCTGTCATCGAGATGGTCTTCATCGGCGTCCAGACCTGGGTGCTCTGGAAACACTGCAAAGACTGTGTTCGGGTCCAGACCAACTTCACTAGGTGTGGCCTGATGCTGACCCTGGCCACAAACCTGCTGCTGTGGGTTCTGGCCGTTACCAATGACTCCATGCACCGAGAGATCGAAGCTGAGCTTGGCATCCTCATGGAAAAATCCACAGGCAATGAGACCAACACCTGTCTGTGCCTCAATGCCACCGCGTGTGAAGCTTTCCGGAGAGGCTTCCTGATGCTCTACCCCTTCAGCACTGAGTACTGCCTCATCTGCTGTGCTGTGCTGTTTGTCATGTGGAAGAACGTGGGCCGCCACGTGGCACCCCACATGGGTGCCCACCCTGCCACCGCACCCTTCCACCTGCACGGGGCCATCTTCGGGCCGCTGCTGGGCCTGCTGGTGCTGCTGGCAGGTGTGTGCGTCTTTGTGCTCTTCCAAATCGAGGCCAGTGGCCCTGCCATTGCTTGCCAGTACTTCACCCTCTACTATGCCTTCTATGTGGCTGTGCTGCCCACCATGAGTCTGGCGTGCCTGGCGGGCACAGCCATACACGGGCTGGAGGAGAGAGAGCTGGACACGGTCAAGAACCCTACCCGCAGCCTGGATGTGGTGCTGCTAATGGGTGCTGCACTGGGCCAGATGGGCATCGCCTATTTCTCCATCGTGGCCATTGTGGCCAAGCGCCCGCATGAGCTGCTCAACCGCCTCATCCTGGCCTACTCGCTGCTGCTCATCCTGCAGCACATCGCTCAGAACCTCTTCATCATCGAGGGCCTGCACCGGCGCCCACTCTGGGAGACAGTTCCCGAGGGCCTGGCAGGAAAGCAGGAGGCTGAGCCTCCCCGCAGAGGCTCCTTGCTGGAGCTGGGCCAGGGCCTGCAGCGGGCCTCACTGGCCTACATCCACTCCTACAGCCACCTCAACTGGAAGCGGAGGGCACTCAAGGAGATCTCACTCTTCCTCATCCTCTGCAATATCACACTGTGGATGATGCCTGCATTTGGCATACACCCGGAGTTTGAGAACGGGCTAGAAAAGGATTTCTACGGCTACCAGATATGGTTCGCCATCGTCAACTTCGGCCTGCCTCTGGGGGTCTTCTACCGCATGCACTCTGTGGGAGGCCTGGTGGAGGTCTACCTGGGGGCCTGA
Amino sequence
MPLPASAPAEATPMPSSEAQETEAAPEKENRVDVGAEERAAATRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFRVGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNLLLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEYCLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQIEASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLMGAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNITLWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA*