ENST00000530500.5 ATG13

Information
Transcript ID
ENST00000530500.5
Genome
hg38
Position
chr11:46,617,563-46,672,660
Strand
+
CDS length
1,206
Amino acid length
402
Gene symbol
ATG13
Gene type
protein-coding
Gene description
autophagy related 13
Gene Entrez Gene ID
9776
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 46,617,563 46,617,890
2 46,645,339 46,645,419
3 46,645,870 46,645,989
4 46,649,137 46,649,183
5 46,650,177 46,650,317
6 46,656,233 46,656,273
7 46,657,095 46,657,191
8 46,657,524 46,657,622
9 46,659,392 46,659,485
10 46,665,383 46,665,519
11 46,667,773 46,667,887
12 46,668,499 46,668,576
13 46,668,794 46,668,910
14 46,669,404 46,669,532
15 46,672,255 46,672,660
CDS
Exon number Type Start Stop
3 CDS 46,645,957 46,645,989
4 CDS 46,649,137 46,649,183
5 CDS 46,650,177 46,650,317
6 CDS 46,656,233 46,656,273
7 CDS 46,657,095 46,657,191
8 CDS 46,657,524 46,657,622
9 CDS 46,659,392 46,659,485
10 CDS 46,665,383 46,665,519
11 CDS 46,667,773 46,667,887
12 CDS 46,668,499 46,668,576
13 CDS 46,668,794 46,668,910
14 CDS 46,669,404 46,669,532
15 CDS 46,672,255 46,672,332
Other genome
Genome Chromosome Start End Links
hg19 chr11 46,639,113 46,694,210 Link
CDS sequence
ATGTGTGTGGAGATTTCACTTAAGACTTCTGAGGGAGATTCCATGGAGCTGGAAATATGGTGTCTTGAAATGAATGAAAAGTGTGATAAAGAAATCAAAGTTTCCTACACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCCCTTCTTGCTATAACTAGGGTGACACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATGAATATGTCATATTATACAGGATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCATCACTCTTTCTTGTGCTTACAGAATTAACTTGGCATTCATGTCTACCAGGCAATTTGAGAGGACCCCACCTATCATGGGGATTATTATTGATCACTTTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATTACAGAACTGCTGGTGAGGACACTGGAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGTGACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATAGACTTTAAACCAGCTTTTTCTAAAGATGACATTCTTCCGATGGACCTGGGGACCTTCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATGGCTGAAGACTTGGACTCATTACCAGAGAAGCTGGCTGTGCATGAGAAGAATGTCCGCGAGTTTGATGCCTTTGTGGAAACCCTGCAGTAA
Amino sequence
MCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNRLSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPVGTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGVIYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ*