ENST00000675555.1 B3GALNT2
Information
- Transcript ID
- ENST00000675555.1
- Genome
- hg38
- Position
- chr1:235,449,155-235,498,827
- Strand
- -
- CDS length
- 1,281
- Amino acid length
- 427
- Gene symbol
- B3GALNT2
- Gene type
- protein-coding
- Gene description
- beta-1,3-N-acetylgalactosaminyltransferase 2
- Gene Entrez Gene ID
- 148789
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 235,449,155 | 235,450,340 |
| 11 | 235,453,090 | 235,453,146 |
| 10 | 235,454,156 | 235,454,315 |
| 9 | 235,455,559 | 235,455,684 |
| 8 | 235,458,603 | 235,458,786 |
| 7 | 235,465,636 | 235,465,714 |
| 6 | 235,470,850 | 235,470,960 |
| 5 | 235,480,054 | 235,480,149 |
| 4 | 235,484,322 | 235,484,515 |
| 3 | 235,489,168 | 235,489,268 |
| 2 | 235,494,681 | 235,494,828 |
| 1 | 235,498,719 | 235,498,827 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 235,450,206 | 235,450,340 |
| 11 | CDS | 235,453,090 | 235,453,146 |
| 10 | CDS | 235,454,156 | 235,454,315 |
| 9 | CDS | 235,455,559 | 235,455,684 |
| 8 | CDS | 235,458,603 | 235,458,786 |
| 7 | CDS | 235,465,636 | 235,465,714 |
| 6 | CDS | 235,470,850 | 235,470,960 |
| 5 | CDS | 235,480,054 | 235,480,149 |
| 4 | CDS | 235,484,322 | 235,484,515 |
| 3 | CDS | 235,489,168 | 235,489,268 |
| 2 | CDS | 235,494,681 | 235,494,718 |
CDS sequence
ATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAGGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGCTGGGGAGGGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGAAGGTGATGCTCTCTTACACAACCTTCATTCTCGCCCTCAAAGACTTATTGATCATATAAGGAATCTCCATGAGGAAGATGCCTTACTGAAGGAGGAAAGCAGCATCTATGATGATATTGTTTTTGTGGATGTTGTCGACACTTATCGTAATGTTCCTGCAAAATTATTGAACTTCTATAGATGGACTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGACAGATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAAGAATCTGGATGGGCCTAATTTTTGGTGGGGAAATTTCAGACTGAATTGGGCAGTTGACCGAACCGGAAAGTGGCAGGAGTTGGAGTACCCGAGCCCCGCTTACCCTGCCTTTGCATGTGGGTCAGGATATGTGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAAGACCTATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGGCTGCCATAGGACCTAAAAGATACCAGGACAGTCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGAACTGACGGAACTGTGGAAACTGAAGGAACGGTGCGGTGATCCTTGTCGATGTCAAGCAAGATAA
Amino sequence
MRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR*