ENST00000374165.6 C9orf43

Information
Transcript ID
ENST00000374165.6
Genome
hg38
Position
chr9:113,410,747-113,429,690
Strand
+
CDS length
1,386
Amino acid length
462
Gene symbol
C9orf43
Gene type
protein-coding
Gene description
chromosome 9 open reading frame 43
Gene Entrez Gene ID
257169
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 113,410,747 113,411,001
2 113,413,445 113,413,644
3 113,413,759 113,413,894
4 113,419,108 113,419,165
5 113,421,103 113,421,203
6 113,422,549 113,422,585
7 113,423,326 113,423,498
8 113,424,166 113,424,316
9 113,425,019 113,425,076
10 113,425,344 113,425,420
11 113,425,643 113,425,730
12 113,428,147 113,428,223
13 113,428,900 113,428,963
14 113,429,172 113,429,690
CDS
Exon number Type Start Stop
2 CDS 113,413,494 113,413,644
3 CDS 113,413,759 113,413,894
4 CDS 113,419,108 113,419,165
5 CDS 113,421,103 113,421,203
6 CDS 113,422,549 113,422,585
7 CDS 113,423,326 113,423,498
8 CDS 113,424,166 113,424,316
9 CDS 113,425,019 113,425,076
10 CDS 113,425,344 113,425,420
11 CDS 113,425,643 113,425,730
12 CDS 113,428,147 113,428,223
13 CDS 113,428,900 113,428,963
14 CDS 113,429,172 113,429,386
Other genome
Genome Chromosome Start End Links
hg19 chr9 116,173,027 116,191,970 Link
CDS sequence
ATGGACTTGCCAGATGAGAGCCAGTGGGACGAAACCACCTGTGGCTTGGCTGTTTGTCAGCACCCACAATGCTGGGCAACTATCCGCCGCATTGAGAGGGGCCATCCTCGAATCCTCGGCTCATCCTGCAAAACTCCCCTGGATGCTGAAGATAAACTCCCAGTGCTCACCGTGGTAGACATCTTAGATTCCGGCTTTGCAGCTCATCATTTACCAGAATGTACCTTTACTAAGGCCCATTCTTTATTGTCTCAGAGTTCAAAGTTTTACTCCAAATTTCATGGCAGGCCTCCGAAGGGTTTACCTGACAAAAGTTTGATCAACTGTACTAACAGACTTCCCAAATTTCCAGTGTTGAATTTGAATGAGACGCAACTTCCCTGCCCTGAAGATGTTAGAAATATGGTTGTATTGTGGATCCCAGAAGAAACAGAGATACATGTGAGCCAGCATGGGAAGAAGAAAAGAAAGAACTCGGCAGTGAAAAGCAAGTCATTTCTGGGTCTCTCTGGAAATCAGTCCGCAGGAACACGAGTAGGAACACCAGGGATGATCGTGCCTCCCCCAACCCCAGTGCAATTGTCTGAACAATTCAGTTCAGATTTCCTACCTCTCTGGGCTCAATCCGAAGCGTTACCTCAGGATCTACTGAAGGAACTTTTGCCAGGTGGAAAGCAAACCATGCTCTGTCCAGAGATGAAGATAAAATTGGCCATGATGAAAAAGAATCTTCCCTTGGAAAAGAACCGACCTGACAGTGTGATTTCTTCTAAGATGTTTCTATCTATACACCGCCTCACCCTGGAAAGACCAGCACTGCGATATCCTGAACGTTTGAAGAAATTACATAACCTGAAGACAGAAGGTTACAGGAAACAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAACAGAAGAAGGTGAAAACACCTATTAAGAAACAGGAGGCTAAAAAGAAAGCCAAGAGTGATCCAGGGATCCAGAGCACTTCACATAAACATCCAGTTACCACCGTTCATGACCGTCTCTATGGTTACAGAACTCTGCCAGGTCAGAACAGTGACATGAAGCAGCAGCAGCAGATGGAAAAAGGAACCACTTCGAAACAGGATTCCACGGAGAGACCAAAGATGAACTACTATGACCATGCGGATTTCCACCACAGTGTAAAAAGTCCTGAATTGTATGAAACAGAACCCACTAACAAGGACATTAGTGCTCCAGTGGACGCTGTGCCAGAAGCCCAGGCTGCCAGGCAAAAGAAGATCTCCTTTAACTTTTCAGAAATTATGGCTAGCACAGGCTGGAACTCTGAGCTCAAACTACTTAGGATTCTTCAGGACACTGATGATGAGGATGAGGAGGACCAGTCCTCTGGGGCAGAGTGA
Amino sequence
MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVDILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLNLNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVGTPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQKKISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE*