ENST00000538735.5 SAP25
Information
- Transcript ID
- ENST00000538735.5
- Genome
- hg38
- Position
- chr7:100,572,228-100,573,647
- Strand
- -
- CDS length
- 600
- Amino acid length
- 200
- Gene symbol
- SAP25
- Gene type
- protein-coding
- Gene description
- Sin3A associated protein 25
- Gene Entrez Gene ID
- 100316904
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 100,572,228 | 100,572,571 |
| 5 | 100,572,654 | 100,572,751 |
| 4 | 100,572,860 | 100,573,013 |
| 3 | 100,573,106 | 100,573,212 |
| 2 | 100,573,297 | 100,573,379 |
| 1 | 100,573,597 | 100,573,647 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 100,572,287 | 100,572,571 |
| 5 | CDS | 100,572,654 | 100,572,751 |
| 4 | CDS | 100,572,860 | 100,573,013 |
| 3 | CDS | 100,573,106 | 100,573,168 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 100,169,851 | 100,171,270 | Link |
CDS sequence
ATGACTCCACTAGCGCCCTGGGACCCCAAGTATGAAGCCAAAGCAGGACCTCGGCCGGTGTGGGGGGCCAACTGTAGCTCAGGAGCCTCGTTCTCAGGCCGGACGCTGTGTCACCCCTCATTCTGGCCGCTGTATGAAGCAGCCTCGGGCAGGGGTCTCAGGCCCGTGGCCCCTGCCACAGGGCACTGGAATGGACAGCAGGCGCCCCCAGATGCAGGGTTCCCGGTGGTGTGCTGTGAAGATGTCTTCCTCTCGGACCCTCTGCTGCCCCGGGGGCAGCGTGTTCCCCTGTACCTGTCCAAGGCCCCCCAGCAGATGATGGGCTCCCTGAAACTGCTGCCGCCGCCCCCCATCATGTCTGCCAGGGTGCTCCCCCGCCCATCACCCTCCCGGGGCCCCTCCACTGCCTGGCTCAGCGGGCCGGAGCTGATCGCTCTCACTGGCCTGCTGCAGATGAGCCAGGGGGAGCCTAGGCCCAGCTCCTCCGCGGTTGGCCCCCCAGACCATACCTCTGACCCACCCAGCCCCTGTGGTAGCCCCAGCAGTTCTCAGGGTGCTGACCTCTCTCTCCCACAGACCCCAGACACCCATTGTCCATAG
Amino sequence
MTPLAPWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP*