ENST00000290418.4 CCDC142
Information
- Transcript ID
- ENST00000290418.4
- Genome
- hg38
- Position
- chr2:74,474,102-74,482,996
- Strand
- -
- CDS length
- 2,232
- Amino acid length
- 744
- Gene symbol
- CCDC142
- Gene type
- protein-coding
- Gene description
- coiled-coil domain containing 142
- Gene Entrez Gene ID
- 84865
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 74,474,102 | 74,474,802 |
| 8 | 74,474,916 | 74,475,115 |
| 7 | 74,475,225 | 74,475,402 |
| 6 | 74,475,612 | 74,475,726 |
| 5 | 74,480,769 | 74,480,882 |
| 4 | 74,480,956 | 74,481,065 |
| 3 | 74,481,223 | 74,481,372 |
| 2 | 74,481,452 | 74,481,538 |
| 1 | 74,481,817 | 74,482,996 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 74,474,546 | 74,474,802 |
| 8 | CDS | 74,474,916 | 74,475,115 |
| 7 | CDS | 74,475,225 | 74,475,402 |
| 6 | CDS | 74,475,612 | 74,475,726 |
| 5 | CDS | 74,480,769 | 74,480,882 |
| 4 | CDS | 74,480,956 | 74,481,065 |
| 3 | CDS | 74,481,223 | 74,481,372 |
| 2 | CDS | 74,481,452 | 74,481,538 |
| 1 | CDS | 74,481,817 | 74,482,837 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 74,701,229 | 74,710,123 | Link |
CDS sequence
ATGGCCCAGGCGTCTCGCTCAGGTAGCCTGCCTCCACTCGTTATCGTGCCCCCGCTGAGGGCGCAACCCGGGGGCACTGGGGAGGAGCAGTGGGAGAGAAGTCGAACGGGCGGTCTTCGCTGGGAGGTTCACTGCTGGCCGAGCGGAACTTCTGGAGGGACGCCGTGGTGGCCGACGCCGGCGGATGTGAGCGAGGACTACGAGGCTGATGCTGCGGCCTGGAGGCGGGGGCCCGCAGGTGGCGGCCCGATCCCTCCCGCGCTGCAGCGTCTCCGGGCGGTGTTGCTGCGGCTGCATCGCGAGCGGGAGCAGCTCCTCCAGGCCCGAGACTGCGCCTACCACCTACAGTCGGCTGTGCGACTCATGAAGACCCTGAGTCCTGGCTCGCCATCCGGCGGCCCTAGCCCCTTGCCCCAGTGGTGCCGCGACCTGCAGCTGCACCCTTCCCAAGGGGCGGTTCTGCGAATCGGCCCTGGGGAGACTCTCGAGCCGCTGCTGCTAGCGCGCCCCATCGGACTAGCCGCCCAGTGCCTGGAGGCTGTCATCGAGATGCAGCTTCGCGCTCTCGGCCGGGAGCCCGCCAGCCCGGGCCTGTCGTCCCAACTCGCCGAGCTGCTCTTTGCACTTCCCGCCTACCACACACTACAGAGAAAAGCCTTGAGCCACGTCCCAGGGGCCGCACGTCCTTTCCCCACGTCCCGTGTGCTCCGCCTCTTGACGGGGGAGCGGGGTTGCCAGGTGGCAAGTCGGCTGGACGAGGCGCTCCAAGGATCGGCGTTGAGGGACCAGCTCCGCAGGCGGTGCCAAGAGGAGGGGGATCTGCTACCAGGGCTGCTGGGCCTGGTCGGGGGCGTGGCGGGTTCAGCCAGCTGTGGACTAGGGCTCGGAGGGGCTGGGGCCTTGTGGAGCCAATACTGGACCCTGCTGTGGGCAGCCTGTGCTCAGAGTCTGGACCTAAATCTGGGACCCTGGAGGGACCCCAGGGCAACAGCGCAACAGCTGAGTCAGGCACTGGGTCAGGCATCCCTGCCTCAGGAGTGTGAGAAGGAGCTGGCATCTTTGTGTCACAGACTACTTCATCAGTCGCTTATCTGGAGCTGGGACCAAGGTTTCTGCCAGGCCTTGGGATCAGCTCTTGGGGGTCAGAGCAGCCTTCCCACATCCTCTGGCACTGCTGAACTTTTGCAGCAGCTCTTTCCTCCTCTCTTGGATGCCCTTCGAGAGCCCAGGTTACGACGGATTTTCTGCCAGCCTGCAGGTCTCTGTACCCTTCAGACCACCTTGCTCTGGTTCCTGGGCAGAGCTCAGCAGTACTTGGCAGCATGGGACCCAGCTTCCTTCCTGCTCCTGATCCAAAAGGACTTACCTCCTCTGTTGCATGAGGCAGAAGCTTTGTATAGCCTGGCCTCAGAGGAAAGCTTAGCTCTGGAAGTGGAGCAGCAGCTGGGCCTGGAGATCCAGAAGCTGACTGCACAGATCCAGCTCCTGCCTGAAGAGTCACTAAGTGTCTTTTCTCAAGAATGTCATAAACAAGCCATGCAAGGTTTCAAGCTCTACATGCCACGGGGTCGGTACTGGCGGCTTCGTCTCTGTCCTGAACCTCCCAGTGCTCCTAGTGAGTATGCTGGTTTAGTGGTCCGCACCGTACTGGAGCCTGTGTTGCAAGGATTGCAAGGGTTGCCACCTCAAGCCCAGGCCCCTGCCCTTGGTCAGGCTCTGACGGCCATCGTGGGTGCCTGGCTTGACCACATTCTTACCCATGGGATTCGGTTCAGCCTGCAGGGAGCGCTGCAGCTCAAACAAGACTTTGGAGTGGTCAGGGAGTTGCTGGAAGAGGAGCAGTGGAGCCTGTCCCCTGATCTCCGCCAGACCCTGCTCATGCTCAGCATCTTCCAGCAGCTGGATGGGGCCCTGCTGTGTCTGTTGCAGCAGCCCCTGCCCAAGTCTCAAGTCCACAGGAGGCCCCCCTGTTGCTGTGCTTGTCAGGAGGTCCAGACCACGAAATTGCCCAGCAGCTGCCTCAATAGCCTGGAGAGCTTGGAGCCCCCGCTCCAGCCTGGAACATCTCCAGCCCAGACAGGTCAGCTGCAAAGCACACTAGGAGGAAGGGGACCTAGCCCGGAGGGCTACCTGGTGGGAAATCAGCAGGCCTGGCTTGCCCTCAGGCAACACCAGCGACCCCGTTGGCACCTGCCGTTTTTTTCCTGCCTGGGAACCAGTCCTGAATCCTAA
Amino sequence
MAQASRSGSLPPLVIVPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTPADVSEDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVRLMKTLSPGSPSGGPSPLPQWCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEAVIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLTGERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLGGAGALWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEKELASLCHRLLHQSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDALREPRLRRIFCQPAGLCTLQTTLLWFLGRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAPSEYAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLKQDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEGYLVGNQQAWLALRQHQRPRWHLPFFSCLGTSPES*