ENST00000533683.7 SAMD1

Information
Transcript ID
ENST00000533683.7
Genome
hg38
Position
chr19:14,087,851-14,090,751
Strand
-
CDS length
1,299
Amino acid length
433
Gene symbol
SAMD1
Gene type
protein-coding
Gene description
sterile alpha motif domain containing 1
Gene Entrez Gene ID
90378
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 14,087,851 14,088,575
4 14,088,671 14,088,782
3 14,088,880 14,088,976
2 14,089,068 14,089,362
1 14,089,785 14,090,751
CDS
Exon number Type Start Stop
5 CDS 14,088,417 14,088,575
4 CDS 14,088,671 14,088,782
3 CDS 14,088,880 14,088,976
2 CDS 14,089,068 14,089,362
1 CDS 14,089,785 14,090,420
Other genome
Genome Chromosome Start End Links
hg19 chr19 14,198,663 14,201,563 Link
CDS sequence
ATGGCGGGGCCCCCGGCCCTACCCCCGCCGGAGACGGCGGCGGCCGCCACCACGGCGGCCGCCGCCTCGTCGTCCGCCGCTTCCCCGCACTACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGCGGCACGGCCCGGAGCCGGAGCGCACGCGCGCCGAGCTCGAGAAACTGATCCAGCAGCGCGCCGTGCTCCGGGTCAGCTACAAGGGGAGCATCTCGTACCGCAACGCGGCGCGCGTCCAGCCGCCCCGGCGCGGAGCCACCCCGCCGGCCCCGCCGGCGCCGCCACAGCAGCAGCAGCCGCCGCCGCCGCAGCCACAGCCGCCGCCGGAGGGGGGCGCGGTGCGGGCCGGCGGCGCGGCGCGGCCCGTGAGCCTGCGGGAAGTCGTGCGCTACCTCGGGGGCAGCGGCGGCGCCGGCGGTCGCCTAACCCGCGGCCGCGTGCAGGGGCTGCTGGAGGAGGAGGCGGCGGCTCGAGGCCGTCTGGAGCGCACCCGTCTCGGAGCGCTTGCGCTGCCCCGCGGGGACAGGCCCGGACGGGCGCCGCCGGCCGCCAGCGCCCGCCCGTCTCGCAGCAAGAGAGGTGGAGAAGAGCGAGTACTTGAGAAAGAAGAGGAAGAAGATGATGATGAAGATGAAGATGAAGAAGATGATGTGTCAGAGGGCTCTGAAGTGCCCGAGAGTGACCGTCCTGCAGGTGCCCAGCACCACCAGCTTAACGGCGAGCGGGGACCTCAGAGTGCCAAGGAGAGGGTCAAGGAGTGGACCCCCTGCGGACCGCACCAGGGCCAGGATGAAGGGCGGGGGCCAGCCCCGGGCAGCGGCACCCGCCAGGTGTTCTCCATGGCAGCCATGAACAAGGAAGGGGGAACAGCTTCTGTTGCCACCGGGCCAGACTCCCCGTCCCCCGTGCCTTTGCCCCCAGGCAAACCAGCCCTACCTGGGGCCGACGGGACCCCCTTTGGCTGTCCTCCCGGGCGCAAAGAGAAGCCATCTGATCCCGTCGAGTGGACCGTGATGGATGTCGTCGAATATTTTACTGAGGCTGGATTCCCGGAGCAGGCGACAGCTTTCCAAGAGCAGGAAATTGATGGCAAATCTTTGCTGCTCATGCAGCGCACAGATGTGCTCACCGGCCTGTCCATCCGCCTCGGGCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTTCAGCAAGGCCACTTTGAGGATGATGACCCCGATGGCTTCTTAGGCTGA
Amino sequence
MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGADGTPFGCPPGRKEKPSDPVEWTVMDVVEYFTEAGFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG*